Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0519 ATGGGAGATATGGATGAAGAAATGGTAGATGAGATTGCAGAGCCGTTTGTGGCGGTGGAAATCGATCTCGATTACGAGTTCGACGCTGTGCGCTACTTTGATTTTAGTCGTGACGAGTCGCCGGCGGAGGCGCGTCAGGCCGAGCTTTGGTTTGAGTCCGCAAAGAGTTATCCTCCTTCTCCTTTTGTAGCAAAGTTGGTTTTGAGGGAGGATATCCTCTTGGGAAATGTTAACACCTCTCCAAAATCAAAAGACATGGAGATCGCGGTGGTACCTGACAGTGACTCTGCTGTTGCCCTGGGCCAAGAGATTTTTACAACGGATGCAAATAACAGAGACTGTGGTGGAACGATCACCAATTTACAGAGTGGCTACCTACAAAATGTCCATAGTCAAGCACAAGAATCAATCTCAGGATTGATATTTTACAATCACATGTTGAATGATAATCCAAAAGCTAAAACTAAGTCTACTGTCAAGTCCGTTCTGCCAAGAAGCTCAACTTTGATGAAACCGACAGCAAGTCAGCTGGCGAAGCAGAACCGACCCCATCAAGTTGGTAGTTTCAGATTCCAGACGCTATTGGCTCAAAATAATGAGAGAGGCTGCATTAATTCTTCTGGGGTTGAAAGTCAAGCTGCCAAGAGGCAGAAACTAGAGGGAGGCCACTTGTTTAAGGTAGCTGATACAAAGGAACAAACAAATTTGGTTCATAAGGTGCCTAAGAAGGATGCCACCATTGATGGAAACTCCATGCAGGCTAGGCTGAAGCTTACTATTCCAAGAGAGCCAAATCTTGAGACAGCATACAGGACACAAAGAATGAGGTCTAAGCATCATACAGAAGTAGACCAAGTGGCATTGAATGTGCATAGATTCAAAGCACGCCCATTAAACAGAAAAATTCTTGAGGCTCCTTCATTACCACTACCAAAAAAGAGCACTCCACGCTTGCCAGAGTTTCAAGAATTTCACCTGAAGACTTCGGAGAGGGCTAGGCAACACACAACTGGTTCATCTTCCTCACTTCATTGCAATGACCCTGATAAGGGCTTGCAGAAACCTAGTACTAACTCTGTTCCAGAAAATGGGAACAAAGATTTGAGAAGACCAAACACCACAGATGCTCCAAAGCAGGATGCATGTGAAACAGTGCGCACCTTTAAAGCTCGTCCTCTTAATAAGAAGATATTTTCAAGCAAAGGAGATATTGGTGTTTTCCGTAATAGCAAGCGGGAAACTACTGTGCCATTGGAATTTAATTTCCAGACAGAGAAGAGGGCTCAGCATAATCCACCAATAGAACTTTTCAATAAGCTTTCCCTGACATCTGAACTTCAACAGAAAAATGATTCTCAGTTCAAAGTGCCTCAACCTACCTGTGTATCTACAAAGGGCTCAAAAGAGAATAGATTGGGTTTTTCCCAACCGGAAAATGAGATAGCATATCTGGTGAAAGACAAACTGCCCCAGTCCAGGGGAGTTCAGATTCAATGTGGAAGCAATGGAGGCATCAACGAAATCAATACTAAATCTGGGATAAGCAGGAGTTTGGGCATCCGCTGA 1566 0.4393 MGDMDEEMVDEIAEPFVAVEIDLDYEFDAVRYFDFSRDESPAEARQAELWFESAKSYPPSPFVAKLVLREDILLGNVNTSPKSKDMEIAVVPDSDSAVALGQEIFTTDANNRDCGGTITNLQSGYLQNVHSQAQESISGLIFYNHMLNDNPKAKTKSTVKSVLPRSSTLMKPTASQLAKQNRPHQVGSFRFQTLLAQNNERGCINSSGVESQAAKRQKLEGGHLFKVADTKEQTNLVHKVPKKDATIDGNSMQARLKLTIPREPNLETAYRTQRMRSKHHTEVDQVALNVHRFKARPLNRKILEAPSLPLPKKSTPRLPEFQEFHLKTSERARQHTTGSSSSLHCNDPDKGLQKPSTNSVPENGNKDLRRPNTTDAPKQDACETVRTFKARPLNKKIFSSKGDIGVFRNSKRETTVPLEFNFQTEKRAQHNPPIELFNKLSLTSELQQKNDSQFKVPQPTCVSTKGSKENRLGFSQPENEIAYLVKDKLPQSRGVQIQCGSNGGINEINTKSGISRSLGIR* 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0519 521 Pfam Cell cycle regulated microtubule associated protein 256 422 IPR027330 -
Vvi2g0519 521 MobiDBLite consensus disorder prediction 329 386 - -
Vvi2g0519 521 MobiDBLite consensus disorder prediction 333 367 - -
Vvi2g0519 521 PANTHER TARGETING PROTEIN FOR XKLP2 17 476 IPR009675 GO:0005819|GO:0005874|GO:0032147|GO:0060236
Vvi2g0519 521 MobiDBLite consensus disorder prediction 450 472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0519 Vvi-Chr2 4445309 4451539 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0519 - - vvi:100242735 1040.41