Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0517 ATGAGTCTCAAGGTGACCATTTTAGTTGCTTCTGCTCTGATTCTAGTAGGGCAAAGTGGAGGAGAAGAAGCAAAGGCTTTTAGAGATGAAGACTTGGAATTGGAACGGCAACTCAAGCTCCTGAACAAACCACCCCATGTATTTTCACAGACCCAGGATGGCAGTACTGTTGATTGTATTGATATCAACAAGCAACTCGCATTTGATCACCCATTGCTTCAAAATCATACCATTCAGATGGAGCCTAGTTCTCTCCCAAAGGGTATGAAACCTGCAAGTGATTTGCCCATCGAACCTGTGAAATTTGAAACAGTTCAATGCCCCCATGGGACGGTACCCGTTCGAAGGACTCGAAAGAAAGATCTGATAGCCGCAAAAACATTATCAACATCATATGGAGCTCCATCCAACGAGGGAGGATACCATGTGAGTAAAATTAATTTCTCAACTTTCATCAGAAATGCAGATTCAGACCGTCTGAACAGCATACAGCTAGGAATATTTGTTATCCCATCGTTGTACTCCGACGACAAACCGCGGTTAACTAGTTCTTGGACTGCGGATGGTCATCAAAAAACTGGTTGCTTCAATCTTCTCTGCCCTGGTTTCGTACAAATTACTCGACAATATTATATGGGCATGCCCTTTACTCGCATTTCTGGTTATGGTGGATCCATTTATTACGTAAATTCTCTAGTTTTCAAGGATCCTGCTAGTGGAAATTGGTGGTTCATAGTACGCAACTCTGAAGGGGTTGTGAATTTTGGGTATTGGCCGGGATCACTATTCAATAATTTGGCGGATCATGCAACAGAATTAGAGTTCGGTGGACAGGTTTATAGCCCTCCAAATCAGCCTTCCCCACAAATGGGCAGCGGACATTTCTATCCTAAAAACGCTTTTAAAACTGCTTCCGTAAGCAATATTGCATTTGTGGATGGATCAAATGTATTAACAGAACCCGAAAATATATCGATGGTACTGACTCCCAACAAGCCAAATTGCTATTATGCAAATTACTGTGAATTTTGGGATGATCCCTCTTTTCTTCTCATCAAGTTTGGCGCAATGCTTTTCCTTCAAAGGAATGCCATCTTTATCGGCTCGTAA 1110 0.4216 MSLKVTILVASALILVGQSGGEEAKAFRDEDLELERQLKLLNKPPHVFSQTQDGSTVDCIDINKQLAFDHPLLQNHTIQMEPSSLPKGMKPASDLPIEPVKFETVQCPHGTVPVRRTRKKDLIAAKTLSTSYGAPSNEGGYHVSKINFSTFIRNADSDRLNSIQLGIFVIPSLYSDDKPRLTSSWTADGHQKTGCFNLLCPGFVQITRQYYMGMPFTRISGYGGSIYYVNSLVFKDPASGNWWFIVRNSEGVVNFGYWPGSLFNNLADHATELEFGGQVYSPPNQPSPQMGSGHFYPKNAFKTASVSNIAFVDGSNVLTEPENISMVLTPNKPNCYYANYCEFWDDPSFLLIKFGAMLFLQRNAIFIGS* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0517 369 Gene3D - 136 254 - -
Vvi2g0517 369 Pfam Neprosin activation peptide 50 135 IPR025521 -
Vvi2g0517 369 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 34 337 - -
Vvi2g0517 369 Pfam Neprosin 151 340 IPR004314 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0517 Vvi-Chr2 4434338 4436260 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0517 - - vri:117930645 612.838