Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0516 ATGGACAGAAGACCGACTTCTCCAAGCTCTCTTGAGACTCATTTTGTAGATATCCATGAAGTCCTCCCTGAAGAAAAGGAAGGAACAATGGCGGATAAAGGGGAGAAGCCACCAAAAAGGCCCAATAAGTTTCGGGACATGAAGAGATCCCAAAGGAATTTCAGCAGGCAGGTCTCGTTAGAGACTGGGTTTTCAGTGCTTAATAGAGAGTCTAAAGCCAAAGATGAGAGGCGTGTTCTCAGGAGAAGTGGAAGAAGCTTTGGAGGTTTTGGTGCTACTAACCGAGTTGGTGGGGATGGAAGAAAAGGAGACTTCAGTATCTTCATGACAAAGTCCGCTCTCACTAAGCAGAATTCCTCATTACCTTTGAGAAGGGAGAGTGAGTTGGATTTTCAGAAAAATGATGGTTCGGGAGTTGATGACTCTGTTCCTGCGGGGAGATACTTTGCTGCTCTTAGAGGGCCTGAACTAGACCAAGTCAAGGAATCTGAAGACATTCTCCTCCCAAAAGATGAGCAATGGCCCTTCCTACTTAGATTCCCAATTGGTTGCTTCGGTATCTGTCTAGGCCTTAGCAGCCAAGCCGTCCTATGGCGTGCCCTTGCAACAAGTCCAGCTACCAAATTCCTCCATGTTACCCCCTTCATCAACCTTGCTCTCTGGTTTCTAGCCCTAGCAGTTCTTCTCTCTGTCTCCTTCATCTACATCCTCAAGTGTGTGTTCTACTTTGAAGCTGTCAAAAGAGAATACTTTCATCCCGTCCGAGTCAACTTCTTCTTTGCCCCCTGGGTTGTCTGCATGTTCCTAGCCCTCAGCCTTCCATCCATTCTTGCTCCTAAAACCCTTCACCCTGCCATTTGGTGTATCTTCATGGCACCTTATTTCTTTCTTGAACTTAAAATCTATGGTCAATGGCTTTCTGGGGGAAAGAGACGTCTCTGTAAGGTAGCCAATCCATCTTCTCATCTCTCAGTAGTTGGAAACTTTGTGGGGGCCATTTTAGCATCCAAGGTGGGATGGCAGGAAGCTGCTAAGTTCTTGTGGGCAGTTGGCTTTGCGCATTATCTCGTGGTGTTTGTCACATTGTATCAGAGGTTGCCTACCAGTGAAGCATTGCCTAAGGAGCTTCACCCTGTGTATTCCATGTTTATTGCAGCGCCGTCGGCTGCAAGCATTGCTTGGGAAACTATATATGGTGACTTTGATGGGTTGTCGAGGACTTGCTACTTCATTGCATTGTTTCTCTATATATCACTGGTTGTTCGGATCAACTTCTTCAGGGGCTTTAGGTTTTCAGTGGCATGGTGGTCTTACACCTTCCCCATGACAACAGTATCAGTGGCAACCATAAAGTATGCAGAGCAGGTCCCTTCAGTTCTAAGCAAGGGCCTTGCAGTATTTCTTTCATTCATGTCATCAACAATGGTCTCAGTGTTGTTCGTCTCTACACTTCTACATGCCTTTGTTTGGCACACCTTGTTCCCCAATGACCTCGCGATTGCCATTACAAAAAGAAAACATGGCAGGGATAAGAAACCGTTTAAAAAGGCCTACGATATAAGGCGTTGGACTAAGCAGTCTCCTTTGTCCTTTGTTTCAGCCATGACCAAAATTAATTCTGCAGACAAGGGTTTGGATGAGCAGAAGGAAGCAGAGCACTGA 1662 0.4603 MDRRPTSPSSLETHFVDIHEVLPEEKEGTMADKGEKPPKRPNKFRDMKRSQRNFSRQVSLETGFSVLNRESKAKDERRVLRRSGRSFGGFGATNRVGGDGRKGDFSIFMTKSALTKQNSSLPLRRESELDFQKNDGSGVDDSVPAGRYFAALRGPELDQVKESEDILLPKDEQWPFLLRFPIGCFGICLGLSSQAVLWRALATSPATKFLHVTPFINLALWFLALAVLLSVSFIYILKCVFYFEAVKREYFHPVRVNFFFAPWVVCMFLALSLPSILAPKTLHPAIWCIFMAPYFFLELKIYGQWLSGGKRRLCKVANPSSHLSVVGNFVGAILASKVGWQEAAKFLWAVGFAHYLVVFVTLYQRLPTSEALPKELHPVYSMFIAAPSAASIAWETIYGDFDGLSRTCYFIALFLYISLVVRINFFRGFRFSVAWWSYTFPMTTVSVATIKYAEQVPSVLSKGLAVFLSFMSSTMVSVLFVSTLLHAFVWHTLFPNDLAIAITKRKHGRDKKPFKKAYDIRRWTKQSPLSFVSAMTKINSADKGLDEQKEAEH* 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0516 553 MobiDBLite consensus disorder prediction 1 55 - -
Vvi2g0516 553 Gene3D - 176 494 IPR038665 -
Vvi2g0516 553 PANTHER S-TYPE ANION CHANNEL SLAH3 102 507 IPR030183 GO:0006873|GO:0008308|GO:0016020
Vvi2g0516 553 MobiDBLite consensus disorder prediction 17 52 - -
Vvi2g0516 553 CDD TDT_SLAC1_like 179 483 - -
Vvi2g0516 553 Pfam Voltage-dependent anion channel 180 484 IPR004695 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0516 Vvi-Chr2 4431533 4434153 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0516 - - vvi:100244459 1089.72