Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0515 ATGGCCTCTACCAAAGCCTTCATCATCATTGCCATGGCCACAGTTTTTCTTCCTTCCATTCTGGGAAAGGAGTTCATCGTTGGAGATAGCACTGGTTGGACAACCAACTTCGATTACCAGGCTTGGGCTCAGGATAAGCACTTCCAAGTTGGTGACAAGCTTGTTTTTAATTACAAGAAGGGAGCTCACAATGTGTTCGAAGTCAATGGAACTGCCTTCCAGCAGTGCTCAATCCCACCTGCAAATGAGGCTCTTACCACTGGAAATGATGTGATTACCCTTGCCACCCCAGGAAATAAATGGTACATTTGCGGTGTTGCCAAACACTGTGCCTTAGGAAACATGAAGCTCCCCATAACTGTGCAACCTCAATTGGGATCTTTGTCACCTTTGCCCTCACCTTCACCGGCTCCTGCCCCCTCAGCCCCGGTTTACTGCAGCCGCAAATACAAGCACTGCCTCTAG 465 0.4882 MASTKAFIIIAMATVFLPSILGKEFIVGDSTGWTTNFDYQAWAQDKHFQVGDKLVFNYKKGAHNVFEVNGTAFQQCSIPPANEALTTGNDVITLATPGNKWYICGVAKHCALGNMKLPITVQPQLGSLSPLPSPSPAPAPSAPVYCSRKYKHCL* 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0515 154 FunFam Cupredoxin superfamily protein 21 126 - -
Vvi2g0515 154 Gene3D - 22 126 IPR008972 -
Vvi2g0515 154 SUPERFAMILY Cupredoxins 22 122 IPR008972 -
Vvi2g0515 154 ProSiteProfiles Phytocyanin domain profile. 23 123 IPR003245 GO:0009055
Vvi2g0515 154 Pfam Plastocyanin-like domain 33 113 IPR003245 GO:0009055
Vvi2g0515 154 CDD Phytocyanin 23 121 - -
Vvi2g0515 154 PANTHER BLUE COPPER PROTEIN 20 122 IPR039391 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0515 Vvi-Chr2 4428884 4429428 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0515 9 138 Miscellaneous Gene Families AT2G31050 38.931 4.18e-24 91.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0515 - - vvi:109124259 301.212