Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0514 ATGGTGGAGGCGCAGACATGGACGACGAGGAGGGGGAGCAATCCGAGGCTGGAGACGACGGAGCAAGTGGTGGACATTCCGGCGACGCCGCCGGGAGGCGTGCGGAATAGCGGAAACGCCATTGGATCGTTCCTGTCGCCGAATGTGTTGACGGCTCTGATAATTGCGTCTTGGTATTTGTCAAACATCGGCGTCCTCCTCCTCAACAAGTATCTCCTGAGCTTCTATGGCTACCGCTACCCAATCTTCCTGACCATGCTCCACATGCTATCGTGCGCTGGATACAGCTACGCCGCCATCAACTGGCTTGAGCTTGTACCCCTCCAGCACATTCTGTCTCGCCGTCAGTTCCTCAAGATCTTCGCCCTCAGCGCCATCTTCTGCTTCTCCGTTGTCTGCGGCAATACCTCTCTGAGATACCTTCCGGTGTCATTCAATCAGGCCATTGGAGCAACGACGCCGTTCTTCACCGCAATTTTCGCCTTCTTGATTACTTGCAAGAAGGAGACTGGTGAGGTGTATTTGGCACTGTTGCCGGTGGTGTTCGGCATCGTTTTGGCGAGTAACAGTGAGCCGTTGTTCCATCTGTTTGGGTTTTTGATTTGCATCGGATCCACTGCTGGGCGTGCTCTGAAATCAGTGGTTCAGGGGATATTGTTGACATCAGAGGCTGAGAAGCTCCACTCAATGAATTTGCTACTGTATATGGCTCCAATGGCGGCTTTGATTCTACTCCCGTTTACTCTTTACATAGAGGGAAATGTGGCCGCTTTCACGGTGGAGAAAGCCAGGGGGGATTCCTTTATCATATTTTTGTTGATTGGGAATGCGACGGTGGCGTATTTGGTGAACTTGACCAACTTTTTGGTCACAAAGCACACCAGTGCATTGACACTGCAGGTGCTGGGGAATGCCAAAGCGGCGGTAGCAGCAGTTGTGTCGGTGTTGATTTTCCGGAATCCGGTGACGGTGATGGGAATGACTGGCTTTGCTGTTACAATAATGGGGGTGGTGCTTTACAGCGAGGCGAAGAAGAGATCCAAAGTTACAACTCATTGA 1059 0.5194 MVEAQTWTTRRGSNPRLETTEQVVDIPATPPGGVRNSGNAIGSFLSPNVLTALIIASWYLSNIGVLLLNKYLLSFYGYRYPIFLTMLHMLSCAGYSYAAINWLELVPLQHILSRRQFLKIFALSAIFCFSVVCGNTSLRYLPVSFNQAIGATTPFFTAIFAFLITCKKETGEVYLALLPVVFGIVLASNSEPLFHLFGFLICIGSTAGRALKSVVQGILLTSEAEKLHSMNLLLYMAPMAALILLPFTLYIEGNVAAFTVEKARGDSFIIFLLIGNATVAYLVNLTNFLVTKHTSALTLQVLGNAKAAVAAVVSVLIFRNPVTVMGMTGFAVTIMGVVLYSEAKKRSKVTTH* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0514 352 SUPERFAMILY Multidrug resistance efflux transporter EmrE 102 189 - -
Vvi2g0514 352 PANTHER SOLUTE CARRIER FAMILY 35 52 345 - -
Vvi2g0514 352 SUPERFAMILY Multidrug resistance efflux transporter EmrE 239 342 - -
Vvi2g0514 352 Pfam Triose-phosphate Transporter family 52 341 IPR004853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0514 Vvi-Chr2 4424613 4425671 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0514 1 349 Organic Solute Cotransporters AT1G12500 76.880 0.0 542
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0514 - - vvi:100266779 676.781