Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0495 ATGTCTTCCGATACTGCAAAGGAAAATGCATCTGTAGTTGATTCATCAGTGACTGATTGGAAACATGATATGGGGAATTTTGATGATCCAGAAAGCTCAAGCTACAAAGCAAATGAGGATGGCTATCCATCTGGGCCAGAAGAACAGCGGCATTCTCACACTGGAATGCTAAATTCAAGTGCAAATAAAAAGGGTAAATTGTATAGTACAAGATATTTCATCATTAAGAGTTTGAACCATCATAATATCCAATTATCGATGGAGAAAGGAATTTGGGCTACTCAAGTCATGAATGAACCAATTTTGGAAGAAGCTTTTCATAATTCTGGTAAAGTGATTCTAATATTCAGTGTCAACATGAGTGGTTTCTTCCAAGGGTATGCCCAAATGATGTCTTCTGTTGGATGGAGACGGGACAATGTATGGAGTCAAGGAAGTGGTGGAAATAATCCTTGGGGACGCAGTTTTAAGGTCAAATGGCTGCGATTACATGATTTGCCTTTCCAAAAAACGCTGCATCTCAAGAATCCACTGAATGACTACAAACCTGTCAAGATCAGTAGGGACTGCCAGGAGTTATCTCAAGAAATTGGAGAAGCTCTTTGTGAGCTCCTTGATGGAAAGACTGATGTGGGTGACAATCTAAGAAAGAATGACTTTTCTGGTGATGATCTTCCTCCAAGAAGGCCTTTTATGGAGCCTTCATGTTCTTTACCAGGTGAAGAGTATAACCTGTCTTCGATGCATATGACATGGACATCCATGCTTTATCCTTCCTTGCTCTACCAACATAAAGCTGAAGCAAATAGATTCCATTTAGCACACCAGAGATCAACCGGACCATTTCTTCCTGAAAATTTGCCTATCTCTTCTGGGCCATCGAAAGTTACAAGGGTGAAACATCCTCGGATTAGTGGTAACTTCACTAGTGTACAAGTGGATCATGATATGTCTTCTGGTTTTGATGTTTGGAATATGTCAGCTGAGAGAAGCCCTCTTGCAAGTACACTGACTGAGGATGATATTCTTGAAATGGTGACGTGGCCAGATGAGAAATGTAAATGCCATCTTGGGTTTTGGATGAAAGTTGTTGCCAAACTATGTGACGGTTGA 1113 0.4061 MSSDTAKENASVVDSSVTDWKHDMGNFDDPESSSYKANEDGYPSGPEEQRHSHTGMLNSSANKKGKLYSTRYFIIKSLNHHNIQLSMEKGIWATQVMNEPILEEAFHNSGKVILIFSVNMSGFFQGYAQMMSSVGWRRDNVWSQGSGGNNPWGRSFKVKWLRLHDLPFQKTLHLKNPLNDYKPVKISRDCQELSQEIGEALCELLDGKTDVGDNLRKNDFSGDDLPPRRPFMEPSCSLPGEEYNLSSMHMTWTSMLYPSLLYQHKAEANRFHLAHQRSTGPFLPENLPISSGPSKVTRVKHPRISGNFTSVQVDHDMSSGFDVWNMSAERSPLASTLTEDDILEMVTWPDEKCKCHLGFWMKVVAKLCDG* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0495 370 Pfam YT521-B-like domain 70 205 IPR007275 GO:0003723
Vvi2g0495 370 PANTHER YTH YT521-B HOMOLOGY DOMAIN-CONTAINING 62 208 IPR045168 -
Vvi2g0495 370 MobiDBLite consensus disorder prediction 21 35 - -
Vvi2g0495 370 MobiDBLite consensus disorder prediction 1 16 - -
Vvi2g0495 370 MobiDBLite consensus disorder prediction 1 61 - -
Vvi2g0495 370 ProSiteProfiles YTH domain profile. 70 205 IPR007275 GO:0003723
Vvi2g0495 370 Gene3D ph1033 like domains 47 215 - -
Vvi2g0495 370 CDD YTH 71 205 IPR007275 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0495 Vvi-Chr2 4309326 4311950 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0495 K20100 - vvi:100254803 718.383