Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0494 ATGACCGCTATGGATGAACTGCCTCTGGTTCTTGTCCATGTCTTGCCGCCATTCGAGATCCCGTTCAAGGGCCGACTTCAGAGTCGATTCCAACTCATCGACTCCTCCGATTCAACTTTCTCCCCACACGCCAGCGTCCTGCTCTGTGTTGGCCCCGCTCCGGTCAGTTCCGACACCCTCCGCCACCTCCCCTCTCTCCAGTGCATCGTCGGCTCAAGCGCCGGCGTAGACCATATTGACCTAGAGGAGTGCCGCCGCCGCGGCATCACTGTCACCAATGCTGGCTCCTCCTTCTGCGAGGACGGCGCTGATTTCGCCATCGGGCTTCTGATCGATGTTCTCCGACGGATATCGGCCGCCGATCGGTACGTTCGAGCCGGTTTGTGGCCGATGAAGGGAGATTACCCACTAGGTTCCAAGTTAGGGGGAAAGCGAGTTGGAATTGTTGGACTGGGGAAAATTGGCTCCGAAATTGCCAAAAGGCTCGTGGCATTTGGCTGCAGAATCGCCTACAACTCCAGGAATAAAAAGTCATCAGTTTCATTCCCATACTATGCAAATATTTGCAACCTTGCTGCTAATAGTGACATACTCATTATTTGTTGTGCCTTGACTAAGGAAACTCACCACTTGATTGACAAGGATGTCATGACAGCATTGGGAAAGGAAGGAGTCATCATCAATGTTGGTCGCGGGGGTCTCATCAATGAAAAGGAATTGGTGCAGTGTCTTGTGCAAGGTCAAATTAGAGGTGCTGGTCTTGATGTGTTTGAGAATGAGCCTGATGTGCCAAAAGAGCTATTTGAATTGGAGAATGTTGTGCTATCTCCACATAAAGCTATTGCGACCCTAGAGTCCTTAGCATCATTGCAAGAGCTGATCGTGGGCAACTTGGAGGCATTCTTCTCTAATAAACCTTTGCTTTCCCCAATAAACCTTGACTAA 945 0.5048 MTAMDELPLVLVHVLPPFEIPFKGRLQSRFQLIDSSDSTFSPHASVLLCVGPAPVSSDTLRHLPSLQCIVGSSAGVDHIDLEECRRRGITVTNAGSSFCEDGADFAIGLLIDVLRRISAADRYVRAGLWPMKGDYPLGSKLGGKRVGIVGLGKIGSEIAKRLVAFGCRIAYNSRNKKSSVSFPYYANICNLAANSDILIICCALTKETHHLIDKDVMTALGKEGVIINVGRGGLINEKELVQCLVQGQIRGAGLDVFENEPDVPKELFELENVVLSPHKAIATLESLASLQELIVGNLEAFFSNKPLLSPINLD* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0494 314 CDD HPPR 8 303 - -
Vvi2g0494 314 FunFam Putative 2-hydroxyacid dehydrogenase 99 283 - -
Vvi2g0494 314 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 107 280 IPR006140 GO:0051287
Vvi2g0494 314 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 42 312 IPR006139 GO:0016616|GO:0051287
Vvi2g0494 314 Gene3D - 41 306 - -
Vvi2g0494 314 FunFam NAD(P)-binding Rossmann-fold superfamily protein 284 306 - -
Vvi2g0494 314 SUPERFAMILY Formate/glycerate dehydrogenase catalytic domain-like 23 134 - -
Vvi2g0494 314 PANTHER 2-HYDROXYACID DEHYDROGENASE-RELATED 10 308 - -
Vvi2g0494 314 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 103 280 IPR036291 -
Vvi2g0494 314 Gene3D - 99 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0494 Vvi-Chr2 4296586 4298704 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0494 K15919 - vvi:100247964 612.838