Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0493 ATGTTAAACGGAGAAACACCATTGCCGCAGAATGGACACCGGAGAAACTCCATGGCTGCTATCACTGGTGAGGCAGAAGCAGAAGCACCAGGGGTGGTATTTGTTCATGGCAGCCCACCGTTTGGCCTCCCTTTCAAGGACCGGTTACTGAGTCGGTTCCAACTCATCCACATGTCTGAGTTACCTGAATCCTCCCACGTCAAGGTCATGCTCTGCATGGATCACACTCCGGTCACCTCCCAGACTCTATATAAACTCCCTTCACTTGAGTGCATCGTGGCATCAAGCGCTGGCGTTGACCACATTGACCTCACGACTTGCCGCCTCCGTGGGATTGCGGTCGCCAACGGCAGTCAGGCTTTCTCTGAGGACGTGGCTGATTACGCCGTCGCCCTCTTGATGGATGTCCTCAGAAAGATTTCGGCGGGCGATAGGTATCTGCGCTCCGGTTTGTGGTCCACGAAGGGAGATTATCCGCTTGGTTGGAAGCTAGGGGGAAAGCGAGTTGGAATTGTGGGACTGGGGAACATTGGCTCTGAAGTTGCCAAAAGGCTCGTGGCCTTTGGCTGCGCCATTGCCTACAACTCCAGGAAGAAAAGGTCATCTGTTTCATTCCCATACTACGCAGATGTGTGCGACCTCGCGGCTAACAGCGACATTCTCGTTATTTGTGGTGCATTGACAAGTGAAACCCACCACATAATCAACAAGGATGTGATGACAGCACTGGGGAAGGAAGGAGTCATCATCAACGTTGGCCGTGGATCTCTCATTAATCAGAAGGAACTGGTGCAGTTTCTGGTGGAAGGTCAGATTAGAGGTGCGGGGCTTGATGTGTTTGAGAATGAACCCATTGTGCCTAGAGAACTACTTGAGTTGGATAATGTTGTGTTGTCTCCACATAATGCTGTTGTGACACCAGAAGCCTTTGAAGCTATGCAAGAGCTGGCCATATCCAACTTGGGGGCCTTCTTCTCTAACAAACCTCTGCTATCACCTATCTAG 1005 0.5134 MLNGETPLPQNGHRRNSMAAITGEAEAEAPGVVFVHGSPPFGLPFKDRLLSRFQLIHMSELPESSHVKVMLCMDHTPVTSQTLYKLPSLECIVASSAGVDHIDLTTCRLRGIAVANGSQAFSEDVADYAVALLMDVLRKISAGDRYLRSGLWSTKGDYPLGWKLGGKRVGIVGLGNIGSEVAKRLVAFGCAIAYNSRKKRSSVSFPYYADVCDLAANSDILVICGALTSETHHIINKDVMTALGKEGVIINVGRGSLINQKELVQFLVEGQIRGAGLDVFENEPIVPRELLELDNVVLSPHNAVVTPEAFEAMQELAISNLGAFFSNKPLLSPI* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0493 334 FunFam Putative 2-hydroxyacid dehydrogenase 122 306 - -
Vvi2g0493 334 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 130 303 IPR006140 GO:0051287
Vvi2g0493 334 SUPERFAMILY Formate/glycerate dehydrogenase catalytic domain-like 46 157 - -
Vvi2g0493 334 CDD HPPR 33 326 - -
Vvi2g0493 334 PANTHER 2-HYDROXYACID DEHYDROGENASE-RELATED 59 330 - -
Vvi2g0493 334 Gene3D - 51 329 - -
Vvi2g0493 334 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 122 303 IPR036291 -
Vvi2g0493 334 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 65 332 IPR006139 GO:0016616|GO:0051287
Vvi2g0493 334 Gene3D - 122 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0493 Vvi-Chr2 4287706 4290381 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0493 K15919 - vvi:100253090 662.529