Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0482 ATGGGTTTTCCGGCAAACGGCGCGGCGGCATCGGACAGGAAGTTGAAGTTTCTGATCTATGGTCGGACCGGCTGGATCGGTGGCCTGTTGGGGAAGCTGTGCGAAGCTCAAGGGCTGGAGTACAGCTACGGCTCAGGGAGGCTCGAGAACAGGGCGTCGTTGGAGGCGGATCTGGCGTCGGTGAAGCCCACACATGTTTTCAACGCCGCCGGAGTCACTGGCAGGCCGAACGTGGATTGGTGCGAGTCGCATAAGGTGGAGACTATCCGGACCAATGTGGCGGGGACCTTAACGCTGGCGGATGTTTGCAGAGAGAAAGGTTTGGTGTTGATTAACTATGCCACCGGCTGTATATTCGAGTACGATGCGAATCATCCGCTCGGGTCAGGTGTCGGGTTCAAGGAGGAGGATACGCCCAATTTTATCGGATCTTTCTACTCCAAGACCAAGGCCATGGTGGAAGATTTGCTGAAGAACTATGAGAATGTATGCACGCTGCGTGTCAGGATGCCCATCTCATCCGATTTATCCAACCCTCGCAACTTCATTACGAAAATCACCCGATATGAAAAGGTGGTTAATATTCCAAACTCAATGACCATATTGGATGAGCTTCTTCCCATCTCCATTGAGATGGCAAAGAGAAACCTCACCGGAATCTGGAACTTCACAAATCCTGGAGTGGTCAGCCATAATGAGATTTTGGAGATGTATCGGGATTATATTGACCCCAATTTTGCATGGAAGAATTTCACTCTCGAGGAGCAAGCTAAGGTGATTGTTGCCCCAAGGAGCAACAATGAGCTTGATGCCAGCAAATTGAAGAAGGAATTCCCCGAGCTCATGTCCATCAAGGAGTCCCTCATAAAATACGTGTTCAAGCCAAATCAGAAGGCCACAGGGGCTTGA 909 0.5072 MGFPANGAAASDRKLKFLIYGRTGWIGGLLGKLCEAQGLEYSYGSGRLENRASLEADLASVKPTHVFNAAGVTGRPNVDWCESHKVETIRTNVAGTLTLADVCREKGLVLINYATGCIFEYDANHPLGSGVGFKEEDTPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNFITKITRYEKVVNIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYRDYIDPNFAWKNFTLEEQAKVIVAPRSNNELDASKLKKEFPELMSIKESLIKYVFKPNQKATGA* 303
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0482 302 CDD dTDP_HR_like_SDR_e 16 288 - -
Vvi2g0482 302 Gene3D - 5 301 - -
Vvi2g0482 302 FunFam Bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase 6 302 - -
Vvi2g0482 302 PANTHER DTDP-4-DEHYDRORHAMNOSE REDUCTASE 14 298 IPR005913 -
Vvi2g0482 302 Pfam RmlD substrate binding domain 16 188 IPR029903 -
Vvi2g0482 302 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 15 288 IPR036291 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vvi2g0482 Vvi-Chr2 4150589 4152137 Dispersed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0482 K12451 - vvi:100254814 612.838