Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0478 ATGCATTCTCCTTGCATTAGGGAGACCTCAGAAGCCTGCTTTCAAGGTTGCTGTCTGGCTTCTTTGCCTGGTTTTCCTGATCCCCATGGCACGGATCCAAAGAATCTCAGCAGTGCTGCTGTATCCAGGTACAATTTTGCTCTCACCACAGTTTCATCTCTCTTCCCAAACACCCAATTCACCAACCATGAATCCCTCCCTCCGTTGGATGAATCGTTTTCTAGCTTCAATAAAGCGTACCCACAATACTCCAACACTAATCAAGCCGATCAGATAAGAGCCCAAGAATACTACCATCTGTCCATGTCCAACCATGTATGTCTTGATTACATTGGCCATGGCCTCTTCTCCTATTCCCAGCTACAAAAACTGCCCTTCTTTGAAATCTCCTACAAGTCAGTAAATTTGAATTCTCAGATACTCTATGGTGGAGAAGAGTCAGAATTGGAATCTAAAATCCGGAAAAGAATTATGGATTTTATGAATATCTCTGAAGCAGACTACTCCATGGTTTTCACTGCCAACCAGTCATCAGCTTTTAAACTTCTAGCAGACTTCTATCCATTCCAGTCTAACCAAAATCTTCTTACGGTCTATGATTATGAGAATGAGGCAGTGGGAGCAATGATCCGTGCATCCAAGAAGAGAAGCGCCCGAGTCCTGTCGGCAGAGTTCTCATGGCCTAATTTGAGGATTCATTCAGCAAAACTGAAGAAGATTATACTAAACAAGAGGAAAAAGAGGAGAGGGTTGTTTGTATTCCCACTTCAGTCAAGGATGACTGGAGCTCGATATTCTTACTTGTGGATGAGCATGGCACAGGAGAATGGGTGGCATGTCTTACTTGATGCATGCGCATTGGGACCTAAGGACATGGAGACCTTGGGCCTCTCTCTCTTTAGGCCAGACTTTCTCATCTGCTCTTTTTTCAAGGTTTTTGGGAAGAACCCATCTGGGTTTGGATGCCTATTTGTCAAGAAATCCAGTGCTTCAATCTTAAAGGATTCAACTACTGCTGTAAGTGTAGGGATTGTGAGTCTTCTTCCAGCTACAAGACGATCTCAGTTCCCTGATGAATCAGCCACTACTGATATAGAGACTGAACAAACATCAAAGCTTAAATTGCATAAGGGTGAGTTGCCAGCAGCAAGTTCCTTGTCTGGGCCTTTACCTGTTCAGAAAATAAGCAATGAAACTTTTGAATCATATGAAATTTCTGATGTTAACTTCAAACAGAAGGGTTCATCATCCTCCGAAATTGTGGAATTGGAGATGCCACTTGACATTCCCCAATCCCTAAACAAAGACAGCAGCGTCAATGGGTACTCACAGATTGAATGTAGAGGCTTGGATCATGCGGATTCATTGGGCCTGATACTGATCAGTTTGAGAGCAAGATTCCTGATCAACTGGCTGGTAAATGCATTAATGAGCCTTCGACACCCACATTCAGAAAATGGACTTCCCCTAGTCAGAATCTATGGCCCAAATGTAGCATTTGACCGAGGACCAGCTGTGGCATTCAATGTGTTTGATTGGAAAGGAGAAAAGGTTGAGCCCACTCTAGTGCAAAAGCTTGCAGATCGAAGCAACATTTCCTTAAGTCATGGATTTTTGCAGCATATATGGTTCTCAGATAAGTACGAAGAAGAGAAAGAGAAGATTCTAGAGCTAAGGACCATTGGAGTGGAAGGAACACTAGGAAATAAAAAGCGAGATAAATCTAGTTCAGGAATATCTGTGGTCTCAGCAGCATTAGGACTCCTAACCAACTTTGAGGATGTGTACAACCTCTGGGCATTTGTATCCCGGTTTCTAGATGCTGACTTTGTGGAGAAAGAGCGATGGAGATATGTGGCTCTAAATCAGAAGACAGTCGAAGTTTAA 1887 0.4308 MHSPCIRETSEACFQGCCLASLPGFPDPHGTDPKNLSSAAVSRYNFALTTVSSLFPNTQFTNHESLPPLDESFSSFNKAYPQYSNTNQADQIRAQEYYHLSMSNHVCLDYIGHGLFSYSQLQKLPFFEISYKSVNLNSQILYGGEESELESKIRKRIMDFMNISEADYSMVFTANQSSAFKLLADFYPFQSNQNLLTVYDYENEAVGAMIRASKKRSARVLSAEFSWPNLRIHSAKLKKIILNKRKKRRGLFVFPLQSRMTGARYSYLWMSMAQENGWHVLLDACALGPKDMETLGLSLFRPDFLICSFFKVFGKNPSGFGCLFVKKSSASILKDSTTAVSVGIVSLLPATRRSQFPDESATTDIETEQTSKLKLHKGELPAASSLSGPLPVQKISNETFESYEISDVNFKQKGSSSSEIVELEMPLDIPQSLNKDSSVNGYSQIECRGLDHADSLGLILISLRARFLINWLVNALMSLRHPHSENGLPLVRIYGPNVAFDRGPAVAFNVFDWKGEKVEPTLVQKLADRSNISLSHGFLQHIWFSDKYEEEKEKILELRTIGVEGTLGNKKRDKSSSGISVVSAALGLLTNFEDVYNLWAFVSRFLDADFVEKERWRYVALNQKTVEV* 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0478 628 PANTHER MOLYBDOPTERIN COFACTOR SULFURASE MOSC 70 587 - -
Vvi2g0478 628 SUPERFAMILY PLP-dependent transferases 99 336 IPR015424 -
Vvi2g0478 628 Gene3D - 131 368 IPR015421 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0478 Vvi-Chr2 4120685 4122643 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0478 - - vvi:100265017 1226.85