Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0476 ATGGGAGTTGGGTTGTGGCGATTCATTCTTGCTGCTTTTGCTGGAGTGCTTGTCTTCTTTCATGGCTTCTGTTCTTCAGAGAAAGCTCCAAACTACAGCTTCATGCACCAAGCCACGTCCGCGCCGGCGATTTCATACTACGACTACATCATTGTCGGCGGTGGTACAGCCGGCTGCCCCTTAGCCGCCACTCTCTCCCAAAACTACAGCGTTTTGCTCCTGGAACGTGGCGGCGCACCCTACGGCAACCCCAACATCACCAATCTGGGTTCCTTTGGCGCCCCATTCTCCGACTTCTCTCCAACATCGCCGTCGCAGCGGTTCGTATCAGAGGACGGCGTTATTAACGCTCGCGCGCGAGTTCTTGGCGGCGGAAGTTGCTTGAACGCGGGGTTCTACACACGCGCGGGGCCGGATTATGTGGAAGAGGTGGGGTGGGATAGTGGGATGGTGAAGGAGTCGTATGAGTGGGTGGAGAAGGTGGTGGCGTTCAAGCCGCCGATGCGGCAGTGGCAGTCGGCGGTGAGAGATGGGCTGCTTGAGGTTGGGGTGTTGCCGTACAATGGGTTTACGTATGACCATATATATGGGACCAAGATTGGTGGAACCATATTTGACCCCGACGGCCACCGTCACACGGCGGCTGATCTGCTGCAATATGCTAACCCTACCGGACTTACTGTTCTTCTTCATGCAACTGTGCATAAGATCACCTTCAGAAGAAGAGGAAAGGTAAGGCCAGTGGCTCATGGGGTGATATTCAGAGACGTGTTAGGGAAGAAGCACAAAGCGTACCTGAAGAGGGACTCCAAGAATGAGATCATAGTCTCATCTGGAGCACTTGGAAGCCCACAACTGTTGATGTTGAGTGGGGTGGGCCCAGCCCAGCAAATTAAGGCCCATAACATTTCACTTGTACTTGACCTGCCCATGGTGGGCCAGAGGATGTCAGATAACCCAATGAACGCCATCTTCATTCCCTCTCCTCTCCCAGTTGAGGTCTCTCTCATTCAAGTCGTGGGCATCACCCACTCTGGCACCTACATCGAAGCCGCAAGCGGTGAAAACTTCGCCGCTAGCGGTCCTCAAAGGGACTTCGGAATGTTCTCCCCCAAGATTGGACAGCTGGCAACAGTGCCCCCAAAGCAAAGAACACCAGAAGCCATAGCCAAAGCCATAGATTCCATGAGCAAGCTTGACGAAACAGCCTTCAGAGGAGGATTCATCCTTGAGAAAATCATGGGCCCAATCTCCACGGGCCATCTGGAGCTCCAAAGCCGCAACCCCAACGACAACCCCTCCGTAACATTCAACTACTTCAAAGAGCCTGAGGACTTACAGAGATGTGTTAATGGCATGCAAATCATTGAAAAAATAATAGAGTCAAAGGCATTCTCCCAATTCAAATATGATTACTTATCAGTCCCAGCATTGATCAACATGACCCTCAATTTCCCAGTCAACTTGGTGCCAAGGCATGATAATGCTTCCACCTCCCTAGAGCAGTTCTGTAAGGACACCGTGATGACTATATGGCATTATCATGGAGGCTGCCAAGTTGGTAGCGTGGTGGATCATGATTATAAGGTTCTTGGCGTTGATGCCCTACGAGTCATCGATGGATCAACCTTCAACGCCTCTCCTGGGACTAATCCTCAGGCCACCGTCATGATGCTTGGAAGGTACATGGGACTAAGGATTCTGAGCGAGAGACTTGCGAGTGATTTGTCCAAGTAG 1737 0.5193 MGVGLWRFILAAFAGVLVFFHGFCSSEKAPNYSFMHQATSAPAISYYDYIIVGGGTAGCPLAATLSQNYSVLLLERGGAPYGNPNITNLGSFGAPFSDFSPTSPSQRFVSEDGVINARARVLGGGSCLNAGFYTRAGPDYVEEVGWDSGMVKESYEWVEKVVAFKPPMRQWQSAVRDGLLEVGVLPYNGFTYDHIYGTKIGGTIFDPDGHRHTAADLLQYANPTGLTVLLHATVHKITFRRRGKVRPVAHGVIFRDVLGKKHKAYLKRDSKNEIIVSSGALGSPQLLMLSGVGPAQQIKAHNISLVLDLPMVGQRMSDNPMNAIFIPSPLPVEVSLIQVVGITHSGTYIEAASGENFAASGPQRDFGMFSPKIGQLATVPPKQRTPEAIAKAIDSMSKLDETAFRGGFILEKIMGPISTGHLELQSRNPNDNPSVTFNYFKEPEDLQRCVNGMQIIEKIIESKAFSQFKYDYLSVPALINMTLNFPVNLVPRHDNASTSLEQFCKDTVMTIWHYHGGCQVGSVVDHDYKVLGVDALRVIDGSTFNASPGTNPQATVMMLGRYMGLRILSERLASDLSK* 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0476 578 Pfam GMC oxidoreductase 47 320 IPR000172 GO:0016614|GO:0050660
Vvi2g0476 578 Gene3D - 164 510 - -
Vvi2g0476 578 Gene3D - 47 560 IPR036188 -
Vvi2g0476 578 SUPERFAMILY FAD/NAD(P)-binding domain 46 570 IPR036188 -
Vvi2g0476 578 PIRSF Alcohol_oxidase 23 578 IPR012132 GO:0050660
Vvi2g0476 578 SUPERFAMILY FAD-linked reductases, C-terminal domain 316 517 - -
Vvi2g0476 578 ProSitePatterns GMC oxidoreductases signature 2. 279 293 IPR000172 GO:0016614|GO:0050660
Vvi2g0476 578 ProSitePatterns GMC oxidoreductases signature 1. 119 142 IPR000172 GO:0016614|GO:0050660
Vvi2g0476 578 PANTHER OSJNBA0019K04.7 PROTEIN 13 572 - -
Vvi2g0476 578 Pfam GMC oxidoreductase 416 561 IPR007867 GO:0016614
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0476 Vvi-Chr2 4097019 4100209 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0476 9 571 Miscellaneous Gene Families AT5G51950 61.053 0.0 692
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0476 - - vvi:100266705 1170.22