Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0475 ATGGTTGCCTTTGGGAAAAAGCTGAAAGAAAGACAAATCCAGGAATGGCAAGGGTATTACATCAACTACAAATTGATGAAGAAGAAAGTAAAACAATATGTTCAACAAATTGAAGGTGGAGCACAAAATCGCCGTCATGTTCTTAAGGACTTCTCTAGAATGCTGGATACTCAGATTGAAAAGATTGTCCTCTTTCTGTTGGAACAACAAGGGCTACTAGCAAGCAGGATAGCCAAGCTTGGAGAACAACATGATGCTCTTCAGCAGCAGCCAGATATTTCTCAAATATCTGAACTACGAGAAGCTTATAGAGCAGTGGGACGAGATCTGTTAAAGCTTCTTTTTTTTGTTGAGATAAATGCTATTGGTTTGCGAAAGATCCTGAAGAAGTTTGATAAACGCTTTGGCTATAGATTCACTGATTACTATGTTAAAACCCGTGCTAATCATCCTTATTCCCAGTTGCAGCAAGTGTTCAAGCATGTGGGAGTAGGGGCTGTTGTGGGAGCCATATCTCGCAATCTTGGAGATCTTCAGGACCGTCAAGGAAGCTACTTATCAATTTATGATCAACCTGCCCTTCCTCTCCAGGATCCTGTGATTGATTCAATAAAAGCAGCCGTAGACAGGTTAACACACTCAACAAACTTCCTTCACTTTTTGGCCCAACATGCACTTATTATGCAAGAAGAGTTACCTACTGCTGTTGAGGAGCATGTAGACGATCAGAGATACCATTTTATGTCACTTCTGTTAAACTTGGCAAATACATTTCTTTATATGGTCAATACGTATATTGTTGTCCCAACAGCGGATAACTACTCCATGAGTCTTGGAGCTGCAGCAACAGTTTGTGGTGTTGTGATTGGGGCAATGGCTGTTGCTCAAGTGTTCTCTTCAGTGTATTTTAGTGCTTGGTCAAATAAATCATACTACAGACCTCTTATATTCAGCAGTATTGTTCTCTTTGTGGGAAATACCATGTATGCACTGGCTTATGACCTTGATTCAATAGTGGTTCTCCTACTTGGTCGTCTTTTCTGTGGATTGGGCTCTGCTAGAGCTGTTAATCGACGGTATATCAGTGATTGTGTACCACTAAAAATTCGCATGCAGGCTTCTGCAGGTTTTGTTAGTGCCAGTGCTCTTGGAATGGCATGTGGTCCTGCTCTTGCTGGATTGCTTCAAATTAATTTCAAGATCTACAAGATCACATTTAACGAAGACACTTTGCCTGGTTGGGTTATGGCTGTGGCATGGCTGGTTTATTTAATTTGGCTATGGATCTCATTTAAAGAGCCTGTTCGCGAGACCCAAGAGAGCAATATTCAGCAGGAATCTAATGCTGAACCAGTAGAGAATGATGCACTTGAAAAGGGTCTTGCTCAACCATTGCTCTTAAGTTCAGAAGACAAGCAAGAAGATGAAGATGGTGACCAAGACAATGATGTGAGTGAAGAAGCTCCTGAGGAGTCTCGTGGGCCAGCCACTTCTATTGGTTCAGCATATAGATTACTTACTCCCTCTGTAAAGGTTCAACTATTGATTTATTTCATGCTCAAATATGCAATGGAGATTTTACTCTCAGAATCTAGTGTTGTTACCACATATTACTTCAATTGGTCCACGAGCACAGTGGCAATCTTTCTTGCATGTCTTGGCCTAACAGTTCTTCCAGTAAACATTGCTGTTGGAAGCTACATAAGCAACATGTTTGAGGATAGGCAAATTTTACTGGCATCTGAAATAATGGTTCTCATTGGCATACTCCTAAGCTTCAACATAATAATTCCATACTCTGTTCCACAATATGTCTGCTCAGGACTCATCATGTTTGTTTCTGCTGAAGTCCTTGAAGGTGTCAATCTGGCACTCCTCTCTCGGGTTATGTCATCAAGGCTTTCTCGTGGAACCTACAATGGTGGACTGCTTTCAACTGAAGCTGGGACAATCGCTCGAGTAATTGCAGATGGCACAATAACCTTGGTTGGTTACTTGGGTGAGAGTAAGCTACTGAATATCACCCTACTTCCTTCACTTCTCATCTGCATATCCTCCATCATTGCTACCTTCTTTACCTACAACTCTCTCTATTAA 2097 0.4134 MVAFGKKLKERQIQEWQGYYINYKLMKKKVKQYVQQIEGGAQNRRHVLKDFSRMLDTQIEKIVLFLLEQQGLLASRIAKLGEQHDALQQQPDISQISELREAYRAVGRDLLKLLFFVEINAIGLRKILKKFDKRFGYRFTDYYVKTRANHPYSQLQQVFKHVGVGAVVGAISRNLGDLQDRQGSYLSIYDQPALPLQDPVIDSIKAAVDRLTHSTNFLHFLAQHALIMQEELPTAVEEHVDDQRYHFMSLLLNLANTFLYMVNTYIVVPTADNYSMSLGAAATVCGVVIGAMAVAQVFSSVYFSAWSNKSYYRPLIFSSIVLFVGNTMYALAYDLDSIVVLLLGRLFCGLGSARAVNRRYISDCVPLKIRMQASAGFVSASALGMACGPALAGLLQINFKIYKITFNEDTLPGWVMAVAWLVYLIWLWISFKEPVRETQESNIQQESNAEPVENDALEKGLAQPLLLSSEDKQEDEDGDQDNDVSEEAPEESRGPATSIGSAYRLLTPSVKVQLLIYFMLKYAMEILLSESSVVTTYYFNWSTSTVAIFLACLGLTVLPVNIAVGSYISNMFEDRQILLASEIMVLIGILLSFNIIIPYSVPQYVCSGLIMFVSAEVLEGVNLALLSRVMSSRLSRGTYNGGLLSTEAGTIARVIADGTITLVGYLGESKLLNITLLPSLLICISSIIATFFTYNSLY* 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0475 698 MobiDBLite consensus disorder prediction 468 497 - -
Vvi2g0475 698 Pfam Major Facilitator Superfamily 256 639 IPR011701 GO:0022857|GO:0055085
Vvi2g0475 698 SUPERFAMILY MFS general substrate transporter 250 693 IPR036259 -
Vvi2g0475 698 Pfam SPX domain 108 145 IPR004331 -
Vvi2g0475 698 CDD SPX-MFS_plant 2 141 IPR045264 -
Vvi2g0475 698 PANTHER INNER MEMBRANE TRANSPORT PROTEIN YAJR 197 698 - -
Vvi2g0475 698 Gene3D MFS general substrate transporter like domains 246 694 IPR036259 -
Vvi2g0475 698 MobiDBLite consensus disorder prediction 472 486 - -
Vvi2g0475 698 ProSiteProfiles SPX domain profile. 2 145 IPR004331 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0475 Vvi-Chr2 4082730 4093062 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0475 - - vvi:100261500 1325.84