Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0473 ATGGACAATGACTTCCTTGAAGAGCAGCAAGTGCCATCTGGCCTCCTAATTGGCATAAAATTTGATGTTTCAACTGAGGAAGATATGGAGAAGATATCTGTTATGAAAATTGATGCAGTCAATGAAATAACTGATCCTAAGTTGGGAGTTCCGAATCCTTCTTGTCAGTGCTCTACGTGTGGCGCCAAAGATACAAAAAAGTGTGAAGGTCACTTTGGGGTTATCAAATTTCCGTTCACAATACTCCATCCATATTTTTTAACAGAAGTTGTCCAGATTTTGAATAAAATTTGCCCAGGATGTAAATCCACTCGGCAAGGTCAATGGGTCAAGGTCAGGTACCTCACTCCTTGTGCTGAACCTTCAGATTGTTGGATAACTTGGATTAGTAATAGTTCTAATTTCTTGCTGATTCTGTGTTTTTTAATTGTTAGTAGAAGTATTTATATTTGGTGA 456 0.3794 MDNDFLEEQQVPSGLLIGIKFDVSTEEDMEKISVMKIDAVNEITDPKLGVPNPSCQCSTCGAKDTKKCEGHFGVIKFPFTILHPYFLTEVVQILNKICPGCKSTRQGQWVKVRYLTPCAEPSDCWITWISNSSNFLLILCFLIVSRSIYIW* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0473 151 SUPERFAMILY beta and beta-prime subunits of DNA dependent RNA-polymerase 18 119 - -
Vvi2g0473 151 FunFam DNA-directed RNA polymerase subunit 7 121 - -
Vvi2g0473 151 PANTHER DNA-DIRECTED RNA POLYMERASE 20 106 IPR045867 GO:0003899|GO:0006351
Vvi2g0473 151 Gene3D RNA polymerase II, clamp domain 7 115 IPR044893 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0473 K16250 - vvi:100254724 235.343