Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0470 ATGAAAGGAGCGATACGATTCGGCGTATCGGATTCGGCCACCGACGCCAACGATTCGGCCTTACAGAGTAAAAGAATAATGGCAGGATCCCCTTTTGATTTTCACAGGGCAGAACCTTCCCAGCAACCAGTGATGACAACACCCCCATTAGATGTGCGCCGGGCTGAATCATCTCGACAGCATGTGAGAGCTCTGAATACCCAATTCGCGAGTTGGGTGCAAACACAATTACAGAATCACCCTGATGAACTTTGGGAAGATGGGGTTCAAGATTACCTAACTCATGCTTCAAACATTATGGAGAAATTTAGTGATGTTGTCAACTGGATCAAAGCAAATGCTGTTAAAGGAGAAAGTTTGTCTGCATTGGGAACTGCTGAAAAAAAGCTGGTGCCTGAAACAAATAATATAGGGGGGAAATTATTTCAGGAGAAAACTAGTTTTGCCCCGGCCAATACTACTTCAATCTTCACAGCTTCTTGGAGTTCTGGAGCGCTCCCCAGCAGCAAAACCCCTATCTTTTTTGGAAGCCAAAGTTCAGTCCCCATAAGTCATAATGCTTCAGAGGATGCTGATGGTGAAAATGATGCGGAGGAGCCTGGCAGTCCATCTGTGAAAAAGACTGAAGAGAAGGGAATCATTGTAGTACATGAAGTCAAATGCAAGCTCTATGTTAAGTCAACCGATCCTGCAGATAAAGATGCATGGAAAGATAAGGGCACCGGTCAGCTTTCAATAAAATGCAAAGAGGGTATTGACAAGGGTACAAAAGAATCTAGGCCAACAATTGTTGTTCGAAATGATGTAGGAAGAGTGTTGCTCAATGCTTTGCTATATCCAGGCATCAAAACAAATCCACAAAAGAACTCACTTGTTGCAATATTCCATACTTCGGGTGAAATCAATGGAAATGATGGTGGCAATAATGATAGCGTTGTAGCTCGCACCTACTTGATTAGGACAAAGTCAGAGGAGGATCGAAATAAGCTGGCATCGGCAATTCAAGAATATGCTCCTTCATCTTGA 1026 0.4347 MKGAIRFGVSDSATDANDSALQSKRIMAGSPFDFHRAEPSQQPVMTTPPLDVRRAESSRQHVRALNTQFASWVQTQLQNHPDELWEDGVQDYLTHASNIMEKFSDVVNWIKANAVKGESLSALGTAEKKLVPETNNIGGKLFQEKTSFAPANTTSIFTASWSSGALPSSKTPIFFGSQSSVPISHNASEDADGENDAEEPGSPSVKKTEEKGIIVVHEVKCKLYVKSTDPADKDAWKDKGTGQLSIKCKEGIDKGTKESRPTIVVRNDVGRVLLNALLYPGIKTNPQKNSLVAIFHTSGEINGNDGGNNDSVVARTYLIRTKSEEDRNKLASAIQEYAPSS* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0470 341 SMART ranbd_3 198 337 IPR000156 GO:0046907
Vvi2g0470 341 MobiDBLite consensus disorder prediction 1 20 - -
Vvi2g0470 341 FunFam AT4g11790/T5C23_220 113 340 - -
Vvi2g0470 341 SUPERFAMILY PH domain-like 207 338 - -
Vvi2g0470 341 Gene3D - 138 340 IPR011993 -
Vvi2g0470 341 ProSiteProfiles Ran binding domain type 1 profile. 207 341 IPR000156 GO:0046907
Vvi2g0470 341 CDD RanBD_NUP50 208 338 - -
Vvi2g0470 341 Pfam RanBP1 domain 205 336 IPR000156 GO:0046907
Vvi2g0470 341 MobiDBLite consensus disorder prediction 183 209 - -
Vvi2g0470 341 PANTHER RAN BINDING PROTEIN 15 338 IPR045255 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0470 K14295 - vvi:100261574 669.463