Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0458 ATGGGTACTGGTGTCTCCCTTCTTGCTTGTGAAAATGAAGGGTGTCCTTCTCGACCCAGGCTTGGAGATTTGCCTGAGGACTGTGTGGCTTTGGTACTGTCGTACTTGGATCCACCAGAAATTTGCAAATTGGCCAAGCTGAATCGGGCGTTTCGCGGGGCTTCTCGGGCTGATCTCGTTTGGGAGCCCAAGTTGCCCTCCAATTATTGTTTGGTTATCGAGAAAGTGTTTAAGGATTTTCCCGAAAATTTGTGTAAGAAAGAGATTTATGCCAGATTGTGTCAGCCTAACCCCTTTGATGGAGGCACAAAGGCTTGGCTGGATAAGAGAACAGGCGGTGTCTGTTTGTCAATCTCTTCAAAGGGATTAGCAATCACCGGAATCGATGATCGGAGATACTGGACCTACATTCCAACTGAAGAATCCAGGTTCAACACTGTTGCATATGTTCAGCAAATCTGGTGGCTTGAGGTTGATGGGGAGGTCGATTTCCCATTTCCAGCAGGAACTTATAGCATATTCTTCAGGCTGCAGTTGGGGCGGGCTTCCAAGAGGCTTGGCCGTAGGATCTGTAACCCCGAGCACGTACATGGTTGGGACATAAAGCCAGTGCGTTTCCAGCTATGGACTTCAGATGGTCAACATGCCACATCTCAGTGTTTCTTGGATGAACCTGGAAGGTGGATTCAGTACCATGCAGCAGACTTTGTTGTTGATAACTCTAATGCACCAACAAAGATTAAATTCTCAATGACCCAGATCGATTGCACACACACCAAAGGTGGTCTTTGTGTAGACTCTGTTCTGATATACCCAAGAGAATTTAGGGAAAGGTTAAAGCATTTTTGA 849 0.4653 MGTGVSLLACENEGCPSRPRLGDLPEDCVALVLSYLDPPEICKLAKLNRAFRGASRADLVWEPKLPSNYCLVIEKVFKDFPENLCKKEIYARLCQPNPFDGGTKAWLDKRTGGVCLSISSKGLAITGIDDRRYWTYIPTEESRFNTVAYVQQIWWLEVDGEVDFPFPAGTYSIFFRLQLGRASKRLGRRICNPEHVHGWDIKPVRFQLWTSDGQHATSQCFLDEPGRWIQYHAADFVVDNSNAPTKIKFSMTQIDCTHTKGGLCVDSVLIYPREFRERLKHF* 283
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0458 282 Pfam F-box domain 23 60 IPR001810 GO:0005515
Vvi2g0458 282 SMART fbox_2 24 64 IPR001810 GO:0005515
Vvi2g0458 282 CDD F-box_AtSKIP3-like 21 66 - -
Vvi2g0458 282 SUPERFAMILY F-box domain 11 94 IPR036047 GO:0005515
Vvi2g0458 282 Gene3D - 9 108 - -
Vvi2g0458 282 PANTHER F-BOX PROTEIN PP2-A15 9 280 - -
Vvi2g0458 282 ProSiteProfiles F-box domain profile. 18 64 IPR001810 GO:0005515
Vvi2g0458 282 Pfam Phloem protein 2 114 272 IPR025886 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vvi2g0458 Vvi-Chr2 3852963 3855441 Dispersed/Wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0458 - - vvi:100241013 597.045