Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0451 ATGGAGTTTAGCCCAACTTCTGATGGGTGCAGAGGGGCCAATTGTACAGGCGACATTAACGGGCCGTGCCCAAATGAGTTGAGGGACCCGGGTGGGTGTAACAACCCATGTACCGTTTTCAAAAATTCTCAGTACTGTTGCGATTCCGGGAGCTGTGGCCCTACAACTTACTCCGAGTTTTTCAAGGATAGGTGCCCAAATGCATACAGTTACCCTGAGGATGATTCAACCAGTTTGTTTACGTGCTCCACTGGCTCTAACTATCGTGTAGTCTTCTGCCCTTGA 285 0.4947 MEFSPTSDGCRGANCTGDINGPCPNELRDPGGCNNPCTVFKNSQYCCDSGSCGPTTYSEFFKDRCPNAYSYPEDDSTSLFTCSTGSNYRVVFCP* 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0451 94 Gene3D Thaumatin 1 94 IPR037176 -
Vvi2g0451 94 SMART tha2 1 94 IPR001938 -
Vvi2g0451 94 SUPERFAMILY Osmotin, thaumatin-like protein 1 94 IPR037176 -
Vvi2g0451 94 ProSiteProfiles Thaumatin family profile. 1 94 IPR001938 -
Vvi2g0451 94 Pfam Thaumatin family 2 94 IPR001938 -
Vvi2g0451 94 PIRSF PR5 1 94 IPR001938 -
Vvi2g0451 94 PANTHER OS03G0233200 PROTEIN 1 94 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0451 Vvi-Chr2 3817057 3817341 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0451 10 94 Receptor kinase-like Gene Family AT5G38280 36.735 1.20e-13 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0451 - - vri:117908081 204.142