Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0440 ATGGCGTTGTACGATCGGACGATTCTCGTCACCGGTGGTGCCGGATTCATCGGCACTCACACTGTGGTACAGCTGCTGAGTGAGGGATTCACGGTTTGGATTATCGACAACCTTGATAATTCTGTTCTGGAGGCTATTGAGAGGGTCCGGGACTTGGTCGGTGCTGAGCTCTCTCGGAAACTCCATTTCAATCTGGGTGATCTTAGGAATAAGGCGGATTTGGAGAAGCTTTTTTCTCAAACCAAATTTGATGCTGTGATCCATTTTGCGGGCCTTAAAGCTGTAGGAGAGAGTGTAGTGAATCCTCGCCGCTATTTTGATAACAATTTGATTGGCACAATTAATCTCTATGAGATCATGGCGAAATATAACTGTAAAAAGATGGTTTTCTCATCATCTGCAACTGTTTATGGTCAACCTGACAAAATTCCATGTGTCGAGGATTTCAACTTAATGGCCATGAATCCATATGGCCGTACTAAGCTTTTCCTTGAAGAAATTGCTCGTGACATTCAAAAGGCAGAACCTGATTGGAAAATTATTTTACTGAGGTACTTTAATCCTGTTGGGGCTCATGAAAGTGGTAAACTTGGTGAAGATCCAAAGGGTATCCCAAATAATCTCATGCCCTACATACAACAAGTGGCTGTTGGCAGATTGCCTGAGCTTAATGTTTATGGTCATGACTATCCCACAAGGGATGGTAGTGCGATACGAGACTACATCCATGTTATGGACCTAGCAGACGGTCATATTGCCGCTCTCCGGAAGCTTTTCACATCAGAGGATATAGGCTGCACTGCATACAACTTGGGGACTGGGCAAGGTACATCAGTACTTGAAATGGTTGCTGCATTTGAGAAAGCATCTGGCAAGAAAATCCCTATCAAACTATGTCCAAGGCGAGCAGGGGATGCAACTGCTGTTTACGCTTCTACGGAGAAAGCTGCAAAAGAGCTTGGTTGGAAGGCAAAGTATGGTATAGCGGAGATGTGCAGGGATCAATGGAAGTGGGCTAGTAATAACCCATGGGGGTATCATTCCAAGCCTTGA 1053 0.4482 MALYDRTILVTGGAGFIGTHTVVQLLSEGFTVWIIDNLDNSVLEAIERVRDLVGAELSRKLHFNLGDLRNKADLEKLFSQTKFDAVIHFAGLKAVGESVVNPRRYFDNNLIGTINLYEIMAKYNCKKMVFSSSATVYGQPDKIPCVEDFNLMAMNPYGRTKLFLEEIARDIQKAEPDWKIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRLPELNVYGHDYPTRDGSAIRDYIHVMDLADGHIAALRKLFTSEDIGCTAYNLGTGQGTSVLEMVAAFEKASGKKIPIKLCPRRAGDATAVYASTEKAAKELGWKAKYGIAEMCRDQWKWASNNPWGYHSKP* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0440 350 FunFam UDP-glucose 4-epimerase 4 282 350 - -
Vvi2g0440 350 FunFam UDP-glucose 4-epimerase 8 203 - -
Vvi2g0440 350 Gene3D - 197 339 - -
Vvi2g0440 350 NCBIfam UDP-glucose 4-epimerase GalE 8 343 IPR005886 GO:0003978|GO:0006012
Vvi2g0440 350 CDD UDP_G4E_1_SDR_e 7 338 IPR005886 GO:0003978|GO:0006012
Vvi2g0440 350 Gene3D - 8 279 - -
Vvi2g0440 350 Pfam GDP-mannose 4,6 dehydratase 9 334 IPR016040 -
Vvi2g0440 350 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 346 IPR036291 -
Vvi2g0440 350 PANTHER UDP-GLUCOSE 4-EPIMERASE 6 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0440 Vvi-Chr2 3729508 3732851 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0440 7 338 Miscellaneous Gene Families AT4G00110 27.666 2.26e-23 98.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0440 K01784 - vvi:100266776 715.687