Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0439 ATGAAAGAAGAAAAAGACTTGGTGGTGATTGCTTGTAGGTTAATGGCTGGCGTTTCACCTGCAGCGGCTCTTTCTCCAGCAACACAGCCATTACCAACAGCATCTCCGGTAATACAGCCGGTATCAACACCATCTCCATCAACACAGCTGTTTCCAACACCATCTCCTTTCTCCTTCTCAGTTGCCACTACAGGGTGGAGCTCTAGACCCTCTGTCTATTTTTCCCATTGCTTCCTCCGAAGCTTGGCTCTTCTTTTCTCTTTTGTCTCTGCTCTCTCCCTCACGGTCACGGCCCCATCAAGTGGACGAGCTGGCTTCACAAAGTACCCAGAATTAACGTACTGTTTGGTTGTAACCATTTTGGCTCTCACTTACTCAGCCTTCCAACTATGTAAAGGTGTTTGTGACATTACCCACAAAGGCTTTCTCATCTCAGACAGGGTGTCCGACTACAGTAGCTTCATTCTTGATCAGTTGGTGGGTTATCTTCTTGCATCCTCTTCTTCGGTGATAATACCAGCCATTCAGCGGCTGGAACAAACTGCACTCTGGAAGGCAGGCATAGTCTCTGTTTGCATGTCCTTTGCAGCTTTCCTTGTTACCGCAATCTGTGCCCTCTTTTCAGGCTACAAACTTTGTAAGAGAGTCATATGGTGA 657 0.4718 MKEEKDLVVIACRLMAGVSPAAALSPATQPLPTASPVIQPVSTPSPSTQLFPTPSPFSFSVATTGWSSRPSVYFSHCFLRSLALLFSFVSALSLTVTAPSSGRAGFTKYPELTYCLVVTILALTYSAFQLCKGVCDITHKGFLISDRVSDYSSFILDQLVGYLLASSSSVIIPAIQRLEQTALWKAGIVSVCMSFAAFLVTAICALFSGYKLCKRVIW* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0439 218 PANTHER CASP-LIKE PROTEIN 4A4 50 213 - -
Vvi2g0439 218 Pfam Casparian strip membrane protein domain 72 205 IPR006702 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0439 - - vvi:100258122 418.313