Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0435 ATGGAGTCTTTGCTACAGAGATACCGTCGCGATCGTCGCAAGCTTCTTGATTTCATCTTATCGTCAGCTTCCATACATCAAATTCCAACCTCATCTGCTCCTACTGCCAATGTTTCTGACAGTGATCTTGATGTCGTCAGTGCTGATTACGTCCTCGATTGCCTCAAATCCGGTGGGGTGGTTGATATCTCGGAAGCAACTAAAAGGTATTATGAAGAATCAGCTCGTCCAGTAATGATTCATTCTCAATTAGGGGATTCCTATTTTCTTTCTTCAGATCCAGATTTGGCTGAATCTCCTCCTCGGCGCCTGCCTCCTCGAATCCATGTGAATCAGAGCAGTAATCATTCATCTTCTTCATCTGAGAACATTGCAATGTCCGGGGATGGCCATGACCTTAAGTATACTACCACAACATCTACCCCTTTGAAGCCTGTAGAAAATCTAAATATTTTTTCATTAGGATTACCTATCCTGAATACAGGATTGTCGGATGATGATTTGCGGGAATCAGCTTATGAAATAATGCTTGCATCCATAGTATTTTCTGGGGTTCAAGTATATACTGTCCAGGATAGAAAGAAAGAGAAAAGTTCAAAATTTCTTTCAGGATTTAAGGGTAAAATGGATAAAGCACATTTACAATCTCAGTCTCTAGGGAGACATTCAGAGCTCATTGACACCATCCGAGTTCAAATGCAGATTTCAGAGGTAATGGATCTATGCATGAGACAAAAGTTGATGCAGTTTGCTACAAGGAAACTGTGTGACCGAATTGATATTCCTCAAATCTCGTTGGGGCTGTTAAATAGCATTTTCAAGTCTGATTTTGTCCATGAAAAGTCATATATGCAATGGAAGTATAGACAGGCAAATATCTTAGAAGAAGTTCTCTATTTTTTTGTCAATCTTAAAACAGCTGAGCGTCTAACCATTAAAAGTTCTCTCGCAAAGATCAGGAACACAAAGGAATGGGATTTTATAATGCCCCCTTCTGAGCGTGCTGAGGTTCTACTAGCTATGAAAGAGGTTGCTTCAAAATTAGCATCTGTGCCAGGACAATTTGGCATACATGATGAGACTTGTTATTGGACTGCTGGTTATCACTTAAACATTAGGATTTATGAGAAGTTGCTCTTTGGTATGTTTGACGTGCTTGACGAAGGGCAGCTCATAGAGGAAGCTGATGAAATCCTGATGCTCATCAAGTTGACCTGGTCTAGTCTAGGCATCAATCAGAGAATGCATAATGTATTATATGGCTGGGTGCTTTTTCAACAGTTTGTTGGGACAGATGAAGCAACATTACTAGAATATGCAATCCTTGAGGTACAACAAGTCCTGTCAACTGAGGATATTGATGGGAAGGAAGAGCAATATATGAATAGCTTAGTATGTTCCAGGGTTTTCAATGGCAAAGAAAAAAAATTAAGTCTGGTGGAGGCTATTTTTTTCTCGATGAGCATCTGGTGTGACAGTAAACTGTTGGATTATCATCTGCATTTTAGTAAGAAACTCGACAACTTTAAAACAGTTATGACCTTGGCATTAGCAGTTGGTTTTATCACTTCTAGTGAAGGCGGTGAAATCAAGTTAACAAAAACTAATGGTTTGGACGAGATTGCTGCTAAAAAACTTCAAACTTATATTCAAAAATCCATTGAAGCTGCATACAGCCGGGTAGCAGCTACCATGGATCTTGAATCTAAATTAGAAAGAACACATCCCTTGGCTCTGCTTGCAAATGAACTAAGATTGATTGCAAATAGAGAGTTAACTGTATTTTGCCCCATCCTACGTCATTGGTGTCCAGAAGCTGGGATGATATCAGCGATGCTGCTAAACCAACTTTATGGGGAGAGACTGAAACCATTCCTCAAAGGAGTAACGAGTCTTTCTGAAGATGTCAAATTAGTGCTTCCTGCAGCTGATATGTTAGATCATGACCTGACTCAACTATATTCTTCTGCATGCAAGGACCATGGGTCATTTCACCCTTTTGTCCAAGATTTTGATCATTATGAGATTGGGGAAATTTCTAGACCTATTATTCTTGATTGGGTGATTGCTCAACATGGGCGCATCTTGGAATGGACTGGACGTGCTTTTGATCTTGAGGATTGGGAACCTTTATCATCTCAGCAAAGACAGGCAGTATCTGTAGTTGAAGTGTTTAGAATTGTAGAGGAGACCGTGGATCAATTCTTTGGGTTGAATCTTCCAATGGATATCACACATTTACAAGCTCTACTATCTGTTATTTTCCATAGCCTGGATACATACTTGCAGAAAGTAATCAGCGAGTTAGTTGAGAAGAGCTATTTATTCCCTTCTACTCCTTCTTTGACTCGTTATAAGGAGATGGTTATTCCAATAGCCAAGAAAAAGTTGGTCGAGTCTACACCCTTGGATGAGAAAGTGAACAATAAGTTGAATGAATTGACAATATCCAAACTGTGTGTCAGATTGAACACTCTTCAATATATTCAGAAACAAATGCGTACCCTAGAAGATGGCATTCGGAAATCTTGGGCACTTGTCAGACCATCTGCTAATCAAAGATGGACCAAAGAGGAATCTCTAGAAAATTTGGAGGAGAGTTCAATGATGTCTAGTGAATCAATTGATGAACTATTTTCCACCACCTTTAACATAATCAGGGATACTGCTACTGATGCTATCAACAAAATTTGTGACTTCATTGGTACCAAAGTTGTGTTTTGGGATTTGAGAGACTCGTTCTTATTTCGTTTATACCGTGGTAATGTTGAAGATGCTCGCTTGGACAGTATTCTTCCACATGTTGATACTGTCCTTGATCAAATATGTGATTTGATTGATGATGCTCTCAGAGACCTCGTGGTTTTAAGCATTTGTAAGGCAGCATTGGAAGCTTTTGTTTGGGTTTTGCTGGATGGAGGACCTTCTCGGGCATTTTCTGATTCAGATATCCCAATGATGGAAGATGACCTCAATATGTTGAAGGACTTATTTGTGGCAGATGGAGAAGGCCTTCCACGCTCATTAGTTCAGAAGAAAGCAGAATTTGCTGAACAAATACTGAGCCTTTTTGCCCTTCAGACAGGAACAGTTATCCAAATGTTGATGACGGCAAGTGAACACATTTCAACAGGATTAGATTCTCGTAAACATGGTCGCCTATGCTTGGGAGACGCTCAAACCTTAGTACGAGTATTATGCCACAAGAAAGATAGAGAAGCTTCGAAGTTCTTAAAAAGGCAATATCAGCTCCCCATGTCTTCAGAATATGACGATACTCCGTCAAAGGATTCAACTTTGAGAAGTCCCCTTATTTCAGATCTCATAAAGCGAAGCGCATCATTCCACTGGACGGAGAAGGGCCAGAGTAGCTTCATATCTTTAAAAAAGAAACTCCAAGAAGCAACTTCCGAAATCAGATGGTAA 3426 0.3987 MESLLQRYRRDRRKLLDFILSSASIHQIPTSSAPTANVSDSDLDVVSADYVLDCLKSGGVVDISEATKRYYEESARPVMIHSQLGDSYFLSSDPDLAESPPRRLPPRIHVNQSSNHSSSSSENIAMSGDGHDLKYTTTTSTPLKPVENLNIFSLGLPILNTGLSDDDLRESAYEIMLASIVFSGVQVYTVQDRKKEKSSKFLSGFKGKMDKAHLQSQSLGRHSELIDTIRVQMQISEVMDLCMRQKLMQFATRKLCDRIDIPQISLGLLNSIFKSDFVHEKSYMQWKYRQANILEEVLYFFVNLKTAERLTIKSSLAKIRNTKEWDFIMPPSERAEVLLAMKEVASKLASVPGQFGIHDETCYWTAGYHLNIRIYEKLLFGMFDVLDEGQLIEEADEILMLIKLTWSSLGINQRMHNVLYGWVLFQQFVGTDEATLLEYAILEVQQVLSTEDIDGKEEQYMNSLVCSRVFNGKEKKLSLVEAIFFSMSIWCDSKLLDYHLHFSKKLDNFKTVMTLALAVGFITSSEGGEIKLTKTNGLDEIAAKKLQTYIQKSIEAAYSRVAATMDLESKLERTHPLALLANELRLIANRELTVFCPILRHWCPEAGMISAMLLNQLYGERLKPFLKGVTSLSEDVKLVLPAADMLDHDLTQLYSSACKDHGSFHPFVQDFDHYEIGEISRPIILDWVIAQHGRILEWTGRAFDLEDWEPLSSQQRQAVSVVEVFRIVEETVDQFFGLNLPMDITHLQALLSVIFHSLDTYLQKVISELVEKSYLFPSTPSLTRYKEMVIPIAKKKLVESTPLDEKVNNKLNELTISKLCVRLNTLQYIQKQMRTLEDGIRKSWALVRPSANQRWTKEESLENLEESSMMSSESIDELFSTTFNIIRDTATDAINKICDFIGTKVVFWDLRDSFLFRLYRGNVEDARLDSILPHVDTVLDQICDLIDDALRDLVVLSICKAALEAFVWVLLDGGPSRAFSDSDIPMMEDDLNMLKDLFVADGEGLPRSLVQKKAEFAEQILSLFALQTGTVIQMLMTASEHISTGLDSRKHGRLCLGDAQTLVRVLCHKKDREASKFLKRQYQLPMSSEYDDTPSKDSTLRSPLISDLIKRSASFHWTEKGQSSFISLKKKLQEATSEIRW* 1142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0435 1141 ProSiteProfiles Munc13-homology domain 2 (MHD2) profile. 925 1035 IPR014772 -
Vvi2g0435 1141 MobiDBLite consensus disorder prediction 91 139 - -
Vvi2g0435 1141 PANTHER PROTEIN UNC-13 HOMOLOG 13 1087 IPR008528 -
Vvi2g0435 1141 ProSiteProfiles Munc13-homology domain 1 (MHD1) profile. 637 769 IPR014770 -
Vvi2g0435 1141 MobiDBLite consensus disorder prediction 108 139 - -
Vvi2g0435 1141 Gene3D - 675 884 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0435 Vvi-Chr2 3679351 3708119 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0435 - - vvi:100259829 2184.45