Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0432 ATGGCGAATGAAGATCTGGAGAGGGGAGGTGGAATGAAGAACAGGGGCAACAACGGCCACCCGCCGGGCTACTACTCCTCTACGTACTATGCGGAGGCTTCCGAGACTCACTGGACTTCGTGGTTGATTCCCATGTTTGTTGTAGCGAATGTCGCTGTTTTTGTGGTGGTCATGTATGTCAATGACTGCCCTAAGAAGAATACCGGGATCGAGGGGGCTTGTGTTGCTAAGTTTCTTCGGAGGCTCTCGTTTCAGCCTCTCAGGGAGAACCCTCTCTTTGGCCCCTCGTCTTCTACATTGGAAAAACTGGGAGGTCTTGAGTGGAACAAGGTAGTTTATGGGGATCAAGGATGGAGACTGGTCACTTGTATCTGGTTACATGCAGGTGTTATACATCTGCTCGCAAACATGTTGAGCTTAGTCTTTATTGGGATTCGCCTCGAGCAACAATTTGGATTTGTGCGTATTGGAATAATCTACTTGGTGTCTGGATTTGGTGGGAGCATTCTCTCTTCCCTTTTCATTCAACACAATATCTCTGTGGGTGCGTCTGGTGCTCTGTTTGGACTTCTTGGAGCAATGCTTTCAGAGCTTATTACCAACTGGAGTATTTATACCAACAAGGCTGCAGCTCTGTTCACACTTGTCGTGATCATTGCCATTAATTTAGCAGTTGGAATTCTTCCTCATGTTGACAATTTTGCCCACATTGGAGGATTCTTGACGGGATTCCTCCTTGGCTTCATGTTGTTGCTCCGACCCCAGTTTGGGTGGGTGAAGCGCCAGCATCGTCCAGCTGATGCCCGTGTCAAATCCAAGCACAAGGTTTATCAATACGCGTTCTGGTTGGTTGCGATGGCTTTACTGATTGTCGGATTTACTGTTGGGTTGGTGATGCTGTTCAGAGGAGAGAATGGAAATGATCATTGTAGCTGGTGTCATTACTTAAGCTGTGTGCCTACCTCTAAATGGAAATGTGACAACTGA 987 0.4732 MANEDLERGGGMKNRGNNGHPPGYYSSTYYAEASETHWTSWLIPMFVVANVAVFVVVMYVNDCPKKNTGIEGACVAKFLRRLSFQPLRENPLFGPSSSTLEKLGGLEWNKVVYGDQGWRLVTCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRIGIIYLVSGFGGSILSSLFIQHNISVGASGALFGLLGAMLSELITNWSIYTNKAAALFTLVVIIAINLAVGILPHVDNFAHIGGFLTGFLLGFMLLLRPQFGWVKRQHRPADARVKSKHKVYQYAFWLVAMALLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSKWKCDN* 329
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0432 328 Pfam Rhomboid family 114 254 IPR022764 GO:0004252|GO:0016020
Vvi2g0432 328 Gene3D - 35 253 IPR035952 -
Vvi2g0432 328 FunFam RHOMBOID-like protein 36 253 - -
Vvi2g0432 328 SUPERFAMILY Rhomboid-like 38 255 IPR035952 -
Vvi2g0432 328 PANTHER RHOMBOID-RELATED 31 326 IPR002610 GO:0004252|GO:0006508|GO:0016020
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vvi2g0432 Vvi-Chr2 3652315 3655516 Dispersed/Transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0432 - - vvi:100241085 616.305