Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0429 ATGTCCGGGCTGCTTAATTCAGGACTCAATGGATCAAGTTCAAATCTTCCAGATACTACAGGAAGATCTTTTACAACTTCTTTTTCTGCCCAATCTGGTTCAGCTGCTGCTTTTAATCATCTTGGGACCATACAAGGGCTACATAATATTCATGGGAGTTTTAACATTCCCAACATGCCAGGCTCCCTTGCATCAAGAAATTCTACAATAAATGGTGGGCATCCTGGTGGTATTCAACAGCCTACAGGAAGCCTATCTAATGGGCGATTTCCAATAAACCATCTTCCCACTGCTCTTTCTCAGCTATCACATGCTAGCTCCCATGGACATCCAGGGGTCACAAATAGAGGAGGATCAGGGGTATCTCCAATGTTAGGGAACACTGGTCCACGAATTACAAGCTCGATAGGTAACCTGGCTGGCGGGGGCAACATTGGAAGGAGTTTAAGCTCTGGTGGAGGATTGGCTATGCCTGGCCTTGCATCTCACCTAAGTTTAATTAGTAATGGATCTGGGAATATGGGTATACAAGGATCTAACAGATTAATGGGTGGCGTTCTTTCACAAGGTACACCACAGGTGATATCTATGCTTGGAAATTCTTATTCTTCTGTGGGAGGGCTACGATCTCAAAACCAAGTCCAAGCAGGGAATAATCATTTAACTTCCATGGCATTACTAAAGGATTTGAGTGTCCATGAGAATGCTCCTTTTGACATAAATGATTTTCCTCAACTGACCGCTCACCCTAATTCTGCTGGTAGTTCTCAAGGACAGCTGGGTTCTCTGAGGAAGCAAAGTGTTGGAGTTGTCCATCAAAACCAAGAATTCAGCATCCAGAATGAAGATTTTCCTGCATTACCTGGATTTAAAGGTGGAAATACTGACTTTCCTGTGGACTCTCACCGGAAAGAACAACTTCATGATAGTGCTGTGTCTATGATGCAATCTCAGCATTTTCCTATGGGAAGGTCTGGTGGATTTAACTTAGGTGTCCCATATTCATCTCATCTTCAGCAGCAACAACAACATGCTTCATCGGTTGGAAGCGGTGGACCACCTTCCATTGGTCTGAGACCTATGAACTCATCTAATACAATATCTGGTGTAGGACCATATGATCAACTCATTCAGCAGTATCAACAGCTTCAGAGCCAGTCTCAATTTCGCATGGGGCAAATTTCAGCGGTTGGTCCACATGGAGACCAGGACCTGAAGTCACAATCACCAGAACCTGTCATTGATGAGTTTGGTTTGCGTGGTTTGTTAAAGGTCATAAGGATGAATAATCCAGACTTGACCTCCCTTGCTTTGGGAATTGATCTTACAACACTGGGTTTGAATTTGAATGCTTCAGACGATCTTCACAAAAGGTTTGCCTCTCCATGGGCTGAAGAACCTCACAAGGGGGAGCCCCAATACAGTATCCCAGAATGTTATTATGCTAAACAGCCGCCTGTGCTTAATCAAGCCCATTTTGCAAAACTACATCTGGAGACATTATTTTATATCTTTTACAGCATGCCGAGAGAAGAGGCACAGCTATATGCAGCACATGAACTGCATGCTAGAGGATGGTTCTACCACAAGGAGCAGCGGCTGTGGCTGACTAGGAATGCAAGCATGAAGCCCCTTGTCGAGACAAACTCGTATGAGAGAGGATCCTACCTTTGTTTTGATCCCAACACGTGGGAGACAGCTTGCAAGGATAACTTCATCCTTCAGTTTGAAATGATCGAGAAAAAACCTGACCTCCCTCAGCATTAG 1767 0.4431 MSGLLNSGLNGSSSNLPDTTGRSFTTSFSAQSGSAAAFNHLGTIQGLHNIHGSFNIPNMPGSLASRNSTINGGHPGGIQQPTGSLSNGRFPINHLPTALSQLSHASSHGHPGVTNRGGSGVSPMLGNTGPRITSSIGNLAGGGNIGRSLSSGGGLAMPGLASHLSLISNGSGNMGIQGSNRLMGGVLSQGTPQVISMLGNSYSSVGGLRSQNQVQAGNNHLTSMALLKDLSVHENAPFDINDFPQLTAHPNSAGSSQGQLGSLRKQSVGVVHQNQEFSIQNEDFPALPGFKGGNTDFPVDSHRKEQLHDSAVSMMQSQHFPMGRSGGFNLGVPYSSHLQQQQQHASSVGSGGPPSIGLRPMNSSNTISGVGPYDQLIQQYQQLQSQSQFRMGQISAVGPHGDQDLKSQSPEPVIDEFGLRGLLKVIRMNNPDLTSLALGIDLTTLGLNLNASDDLHKRFASPWAEEPHKGEPQYSIPECYYAKQPPVLNQAHFAKLHLETLFYIFYSMPREEAQLYAAHELHARGWFYHKEQRLWLTRNASMKPLVETNSYERGSYLCFDPNTWETACKDNFILQFEMIEKKPDLPQH* 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0429 588 MobiDBLite consensus disorder prediction 65 113 - -
Vvi2g0429 588 Pfam NOT2 / NOT3 / NOT5 family 457 577 IPR007282 GO:0006355
Vvi2g0429 588 Gene3D - 411 588 IPR038635 -
Vvi2g0429 588 MobiDBLite consensus disorder prediction 246 265 - -
Vvi2g0429 588 MobiDBLite consensus disorder prediction 65 133 - -
Vvi2g0429 588 MobiDBLite consensus disorder prediction 1 27 - -
Vvi2g0429 588 FunFam - 411 588 - -
Vvi2g0429 588 PANTHER CCR4 NOT-RELATED 44 581 IPR040168 GO:0030015
Vvi2g0429 588 MobiDBLite consensus disorder prediction 337 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0429 Vvi-Chr2 3615695 3627411 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0429 K12605 - vvi:100263354 1128.24