Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0424 ATGGATATAGATGATCCAATCCCAGTTGAATCCCAGGGGCCTGCTTCATCACTTTTATCTGCTGCTACAAATTTGAACCCTTTGTCACTCCTCGATCCACTCCTCGATCCAAGTTCCAATAGAAGTTTGTTCGATAGTGATTCTGACTTGACTAGACGGGGACCATCTGTTTCACATCCAAGGGAGGTGAGGGAGATCCCTATAGAATTCAAGGATGGGAATGAGACATCTCACCAGTCTGGCTCTACTCCTACAATAGAAGATGTCACTGATACTGCCCCTGCACATGAACCAGAAATCCGTGGGGCTGTCATGACTGTGGATGAAGATGATGATGATATTCCAACTGCTCCAAGTGCACAAGGTGCAGGGCAAAATGCCCAAAGAGATGATACTTTGGGTGATAGTTCTCATGATGGACGTTCTAGACCAATTGTTCCTGGTTTTAATAATTTGCCTGACTATGCAAATGATATAGAAGAAGAAATGGTTCGAGCTGCCATTGAGGCTTCAAAACGGGAGGTTGAAGAAGGTTACTCAAATCAGCAATTTGGTGCTCATAATGAGTTAAGTAATCCTGGGCCTCAACAAAGGCCATCTCACCTAGAAGATGCTGCACTTGCACGTGCTGTTTCATTGTCCTTGAAGACTGCTGAACAAGAGAAAGCACTGCGTGAGCAAGGGGGAGAAGTAGGAGCATCAGAACTGGGAGCTGACAGTCCAGCTGAGGTGGAAGAGCTGAGGGAATTACCTGCACCAAATGGAAGGCAAGGATTTGGTTCTTTGGACAAAGTTACTTCAAGTCGACCTAAGTTGGAGGCAGGAAGCTCATCCATCCAAGATGAAGCTGAAGATATTGATGAACAGCCACTGGTTAGGAACAGGACTAGACGTATGTCTTCTGGCTCAGTTGAATCTGTCAAAGAAACTGAAGCAATTGAGGTCAGCCCAGTGTCCAGTCCCAGGCGGCAGAATGTTGGTGCTGATCCTGACCCCAATGGAACTGCATTCCATTCTGATGAGTGGGGAGGCATCTCTTCCGAGGAACATGATGAGGCAGTCATGCTTGAGGCTGCGCTCTTTGGTGGAATTCCTGATCATTTTGGATTTGGTCCCCATCGATTTATGCATCCTGGTTTAGATAGAAATTTTCCACCTATAGCTCGCCCCCCATCACCTAGTTTGGCTGCTCAGCGCTTGATACGGGAACAACAGGATGATGCATATCTTGCATCACTGCAAGCTGACCAAGAAAAGGAATTAAAGGCTAAGGAGGAAGCTGAAGCTCGTCGTTTACAAGAGCAAATGGCTAGAGAAACTGCTCTTGAGGAGGAAAGGCGAAGGGAAGAAGAATCTCGTAGGAAGTTGGAGGAGCAACAGGAGTTTGAGAGACAATTAGCTGCAAAAGAAGCTTCCCTGCCACAAGAACCAGGATCCGATGATGAGAATGCTGTAACTCTTCTTGTGCGGATGCCTGATGGCAGTCGACGAGGCCGTCGATTTCTTAAATCTGATAAGCTACAGTCTCTGTTTAACTTCATAGATGTTGGTAGAGCAGTCAAGCCTGGCACTTACAGATTGGTGAGACCATACCCTCGACGCGCTTTCAGTGATGGAGAGAGCACTTTAAGCTTGAATGAACTAGGGCTGACCAGCAAACAAGAAGCATTATTTCTGGAGTTGATTTAA 1689 0.4642 MDIDDPIPVESQGPASSLLSAATNLNPLSLLDPLLDPSSNRSLFDSDSDLTRRGPSVSHPREVREIPIEFKDGNETSHQSGSTPTIEDVTDTAPAHEPEIRGAVMTVDEDDDDIPTAPSAQGAGQNAQRDDTLGDSSHDGRSRPIVPGFNNLPDYANDIEEEMVRAAIEASKREVEEGYSNQQFGAHNELSNPGPQQRPSHLEDAALARAVSLSLKTAEQEKALREQGGEVGASELGADSPAEVEELRELPAPNGRQGFGSLDKVTSSRPKLEAGSSSIQDEAEDIDEQPLVRNRTRRMSSGSVESVKETEAIEVSPVSSPRRQNVGADPDPNGTAFHSDEWGGISSEEHDEAVMLEAALFGGIPDHFGFGPHRFMHPGLDRNFPPIARPPSPSLAAQRLIREQQDDAYLASLQADQEKELKAKEEAEARRLQEQMARETALEEERRREEESRRKLEEQQEFERQLAAKEASLPQEPGSDDENAVTLLVRMPDGSRRGRRFLKSDKLQSLFNFIDVGRAVKPGTYRLVRPYPRRAFSDGESTLSLNELGLTSKQEALFLELI* 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0424 562 MobiDBLite consensus disorder prediction 73 89 - -
Vvi2g0424 562 MobiDBLite consensus disorder prediction 260 275 - -
Vvi2g0424 562 MobiDBLite consensus disorder prediction 1 20 - -
Vvi2g0424 562 SMART ubx_3 477 561 IPR001012 GO:0005515
Vvi2g0424 562 MobiDBLite consensus disorder prediction 46 72 - -
Vvi2g0424 562 Gene3D - 481 561 - -
Vvi2g0424 562 ProSiteProfiles UBX domain profile. 480 558 IPR001012 GO:0005515
Vvi2g0424 562 MobiDBLite consensus disorder prediction 219 347 - -
Vvi2g0424 562 MobiDBLite consensus disorder prediction 177 198 - -
Vvi2g0424 562 CDD UBX 486 560 - -
Vvi2g0424 562 MobiDBLite consensus disorder prediction 420 465 - -
Vvi2g0424 562 Gene3D - 153 228 - -
Vvi2g0424 562 PANTHER FAS-ASSOCIATED PROTEIN 37 561 - -
Vvi2g0424 562 Pfam UBX domain 480 560 IPR001012 GO:0005515
Vvi2g0424 562 MobiDBLite consensus disorder prediction 32 154 - -
Vvi2g0424 562 Coils Coil 410 466 - -
Vvi2g0424 562 SMART uim 202 221 IPR003903 -
Vvi2g0424 562 SMART uim 159 178 IPR003903 -
Vvi2g0424 562 MobiDBLite consensus disorder prediction 420 482 - -
Vvi2g0424 562 MobiDBLite consensus disorder prediction 173 205 - -
Vvi2g0424 562 SUPERFAMILY Ubiquitin-like 443 558 IPR029071 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0424 - - vvi:100251323 1046.57