Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0415 ATGGGTGTTGGAACCAGTACCTTTGTGATCAGATGGATCAACTTTCTCACCATGCTTTTAGCTGTAGGTGTTATAGGTTTTGGGGTATGGATGAGCACTCATCACGACGGCTGTCGAAAGTCGCTTACACTCCCTGTTCTAGGCCTTGGTGCCTTCATCTTTCTGATATCTATAATCGGGTTCATGGGCGCATTGAAGAACAACTCCATACTGCTATGGATTTATTTGATCATGTTGTGCTTCATTTTGGTGGCAATTCTCGTCTTCACAGTATTGGCGTTCATTATAACAAATAATGGATCTGGTCATAATGTAGCTGGTTTGAGGTACAAGGAGTATCAGCTTCAAGATTACAGTTCATGGTTTCTAAAACAGCTGAACAATACACGTAACTGGAAGCACTTGAAAAGCTGTCTTGTGAAATCTGAAGACTGCAATAACCTGTCCAAAAAATATAAGACTCTTAAGCAATATAAGATTGCAAAATTAACCCCCATTGAGGCTGGTTGCTGTCGACCACCATCTGAATGTGGATATCCAGCTGTCAATGCTTCATACTATGACTTGAGCTTTCACCCAATCAGTTCCAACAAAGATTGCAAACTCTACAAGAATTCCCGAGCAATCAAGTGCTACAATTGTGATTCCTGCAAGGCTGGAGTTGCACAATACATGAAAACTGAATGGAGAGTGGTTGCCATCTTTAATGTGGTTCTCTTTGTTGTCTTGTCAATGGTCTACTTGGTGGGATGCTGTGCAAGACGAAATGCTACAAGCAGCCGCTCTAAAGCTTGA 795 0.4176 MGVGTSTFVIRWINFLTMLLAVGVIGFGVWMSTHHDGCRKSLTLPVLGLGAFIFLISIIGFMGALKNNSILLWIYLIMLCFILVAILVFTVLAFIITNNGSGHNVAGLRYKEYQLQDYSSWFLKQLNNTRNWKHLKSCLVKSEDCNNLSKKYKTLKQYKIAKLTPIEAGCCRPPSECGYPAVNASYYDLSFHPISSNKDCKLYKNSRAIKCYNCDSCKAGVAQYMKTEWRVVAIFNVVLFVVLSMVYLVGCCARRNATSSRSKA* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0415 264 Pfam Tetraspanin family 8 253 IPR018499 GO:0016020
Vvi2g0415 264 PRINTS Transmembrane four family signature 39 65 - -
Vvi2g0415 264 PRINTS Transmembrane four family signature 66 94 - -
Vvi2g0415 264 PRINTS Transmembrane four family signature 8 31 - -
Vvi2g0415 264 PANTHER TETRASPANIN-8-RELATED 6 260 IPR044991 GO:0009734|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0415 Vvi-Chr2 3482614 3486975 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0415 13 262 Miscellaneous Gene Families AT2G23810 37.549 1.26e-64 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0415 - - vvi:100265107 541.962