Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0412 ATGTGCTCCACAATGTGCATTCAAACCCCTACTTTCAGTCCCTCAACCACTCACTGCTTCTTCAGACAGCCAATTTCTTCCCCCTTCCTTTCTTCTTCCAGAAAATTATATAATGTTTTGAGATTGAATGGAGGTGTGAACGTGCAATTCTCGAATGGAAAGAAACGGGGAGCGATATTTTCAGCTTCTGTGGGGCAGAACTCAAGCAATGACACTGAGGGGAAGAGAAAAGTTGTGGAACACATATGTCTGCTCAAAGCAAAGGAGAATCTGTCTGAAGAGGAAGAGAAGGATATGCTGGATTATCTTTACACAACACAATACCAAATGCGTGGCATTATTGCAATCACATTAGGACGTATCTCTGATCAAAACATTGAAAACTATACCCATGCTGTCTACATGCGTTTTCAAAGAAAGGAAGACCTTGGAAAGTTCTATGAAAACCCTTTCTACTTGGGAGTTCTCAGAGAGCGTGTAATGCCTTACTGCCATGGCCTAATTTATGTGGATTTTGAGTCTGAAGTAGAAGATGATATCCTCCCCATATTCCGGAAAGGAGAGGAGTTCAACTACGGTGTGGAGTTCATACTCCTAATTTCATTTGCTAAGAGCAAATTTGGAGGGCCTGCAGAAGACGCTTTGGCTTCTCTTGCAGAGCTGATTTTGGAGTTTCCATCCTTGATTGTGCAATCTACTCAAGGTTTGAATTTTTGTCCCAGCAGCAAGGAATATACACATGGTGTAGTGATACGCTTCCGGTCAATTGAAGCCTTGGAGTTATTCACGGGCAGCACAGAATACAAAGATATATGGAGGTCTAAATTCCAGATGATCGTCCAGAAAACACTTCCCATTCATTTTTCTGTTGATCCGGTGGGTACTGAGATTATGTAG 897 0.4214 MCSTMCIQTPTFSPSTTHCFFRQPISSPFLSSSRKLYNVLRLNGGVNVQFSNGKKRGAIFSASVGQNSSNDTEGKRKVVEHICLLKAKENLSEEEEKDMLDYLYTTQYQMRGIIAITLGRISDQNIENYTHAVYMRFQRKEDLGKFYENPFYLGVLRERVMPYCHGLIYVDFESEVEDDILPIFRKGEEFNYGVEFILLISFAKSKFGGPAEDALASLAELILEFPSLIVQSTQGLNFCPSSKEYTHGVVIRFRSIEALELFTGSTEYKDIWRSKFQMIVQKTLPIHFSVDPVGTEIM* 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0412 298 SUPERFAMILY Dimeric alpha+beta barrel 197 293 IPR011008 -
Vvi2g0412 298 PANTHER - 72 297 IPR044662 -
Vvi2g0412 298 Gene3D - 69 177 - -
Vvi2g0412 298 SUPERFAMILY Dimeric alpha+beta barrel 77 182 IPR011008 -
Vvi2g0412 298 Pfam Stress responsive A/B Barrel Domain 79 173 IPR013097 -
Vvi2g0412 298 ProSiteProfiles Stress-response A/B barrel domain profile. 79 172 IPR013097 -
Vvi2g0412 298 SMART Dabb_2 79 174 IPR013097 -
Vvi2g0412 298 SMART Dabb_2 194 290 IPR013097 -
Vvi2g0412 298 ProSiteProfiles Stress-response A/B barrel domain profile. 194 288 IPR013097 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0412 - - vri:117904069 588.956