Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0410 ATGGGTTTGAAGGTTGTTCTACCTTGTTTGTTGGTTTGTTATATCTTTTTGTATTACAATGGGGTTGAAGGATATATGAAATTATCGAAAGAAGAAGATTTGGAAATAGAGAAAGAACTTAAGCGCTTGAATAAGCCAGCAGTGAAGACTATTAAGGTAAAAATAAAATATATATATGATTGTGTGAACTTCTACAAGCAACCTGCATTTGATCATCCTTTATTGAAGAATCATAATTTTCATCCCCAGATGAGGCCAACATCACCTCCTAGAAGAGTGAGCCCAGAGAAAGAGGTGCCAAAACCTGATTATAAACCCGTGAAAATGGGGTTGGAGGGTGGAGGATGTCCGATGGGAACAGTTCCCATAAGGAGAACTACTAAAGATGATCTCATTAGAGCCAAATTGTATTCAGAAATGCATGCTTCGAAAATTAATCCTCTTACTGACGATCAACCTGGTAAACATTTTGCTGTGGCTCAAACTATCGCAGATATCGATTATGATGGAGTTGGAGCGATTCTTAGCGTATGGAATCTTCCGGTTCAAGCTCCTCAATACACTTCAGGTCGAGTAAAGATTAAAAATGGTGCTGAAAGCTTAGAAGCTGGGTGGACGGTGAATCCGGGTTTATATGGTGGTGATAATAGAACCAGAATGTATATTTATACCAATGCTGGTCAAGCACATTGTTTCAACACACCATGTGGATTTATACAATCTTCAATAGATATACCTGTGGACATGGTTCTCGAACCAGTTTCAAGATATGGTGAAAAACCGTACGGAATAACCTTATCAATTTACCAGGACACGATTAATCTGAACTGGTATCTTAAATACGATGACAATCGTACCGTGATAGGGTGGTGGCCAAGTCGAATATTCACCAATTTAGGAAGCACGGCTACGGGAGCAGAATGGGGAGGAGAGGTATTCAGCCCCTCGAATGTCCCTAGTCCAGGAATGGGTTCCGGTCATCGGATAAAGTTGGACACCAATTATGATGCATTTTGCGCACAAGCCAATATTGTAGTAAATAATACGATTATAAAACCTCCTAGGGACCTAGAGCAGTTTGCTGATAATTTTAATTTCAATATAACCAATAAAGGAGATGTTGGAGGTGACCCTGGTTATCTGATCCTTTATGGGGGTGTTTCTGGAGCAATTGGAAATTGA 1182 0.3976 MGLKVVLPCLLVCYIFLYYNGVEGYMKLSKEEDLEIEKELKRLNKPAVKTIKVKIKYIYDCVNFYKQPAFDHPLLKNHNFHPQMRPTSPPRRVSPEKEVPKPDYKPVKMGLEGGGCPMGTVPIRRTTKDDLIRAKLYSEMHASKINPLTDDQPGKHFAVAQTIADIDYDGVGAILSVWNLPVQAPQYTSGRVKIKNGAESLEAGWTVNPGLYGGDNRTRMYIYTNAGQAHCFNTPCGFIQSSIDIPVDMVLEPVSRYGEKPYGITLSIYQDTINLNWYLKYDDNRTVIGWWPSRIFTNLGSTATGAEWGGEVFSPSNVPSPGMGSGHRIKLDTNYDAFCAQANIVVNNTIIKPPRDLEQFADNFNFNITNKGDVGGDPGYLILYGGVSGAIGN* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0410 393 Pfam Neprosin activation peptide 54 160 IPR025521 -
Vvi2g0410 393 Pfam Neprosin 186 386 IPR004314 -
Vvi2g0410 393 MobiDBLite consensus disorder prediction 80 106 - -
Vvi2g0410 393 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 34 361 - -
Vvi2g0410 393 MobiDBLite consensus disorder prediction 91 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0410 Vvi-Chr2 3445601 3447792 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0410 - - vri:117930734 774.237