Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0405 ATGGGTTTGAGGGTTGTTTTACCTTGTTTGTTTGTTGGTTTGTTATCTCTTTCTATATTACAATGGGAAAATAATTTCATAAAATTATTTTACTACATCCAGACAAAACATGGAGATATATATGATTGTGTGGACTTCTACAAGCAACCTGCATTTGATCATCCTTTATTGAAGAATCATAATTTTCATCCCCAGCCAACATCACCTCCTAGAAGAGTGAGCCCAGAGAAAGAGGTGCCAAAACCTGATTATAAACACGTGAAAATAGGGTTGGAGGGTGGAGGATGTCCGATGGGAACAGTTCCCATAAGGAGAACTACTAAAGATGATCTCATTAGAGCCAAATTGTACTCAGAAATGCATGCTTCGAAAATTAATCCTCTTACTGACGAGGAACCTGGCAAACATGTAAGTTATAATTTCTTTGCTGTGGCTCGAACTTTCGAAAATATCGATTATGATGGAGTTGGAGCGATGCTTAGCGTATGGAATCTTCCGGTTCAAGCTCCTCAATACACTTTAGGTCGAGTAAAGATTAAAAATGGTGCCGAAAGCTTAGAAGCTGGGTGGACGGTGAATCCGGTTTTATATGGTGGTGATAATAGAACCAGAATGTATATTTATACCAATGCTGGTCAAGCACATTTTTCAAGATATGGTGAAAAACCGTACGGAATAACCTTATCAATTTACCAGGACACGATTAATCTGAACTGGTATCTTAAATACGATGACAATCGTACCGTGATAGGTTGGTGGCCAAGTCGAATATTCACCAATTTAGGAAGCACGGCTACGGGAGCAGAATGGGGAGGAGAGGTATTCAGCCCACCGAATGTCCCTAGTCCAGGAATGGGTTCCGGTCATCGGATAAAGTTGGACACCAATTATGATGCATTTTTCGCGCAAGCCAATATTGTAGTAAATAATACGATTATAAAACCTCGTAAGGACCTAAAGCTGTTTACTGATAGTTTTAATTTCGATATAACCAATAAAGGAGATGTTGGAGGGGAACCTGGTTATCTGATCCTTTATGGGGGTGTTTCTGGTGCAATTGGAAATTGA 1068 0.3961 MGLRVVLPCLFVGLLSLSILQWENNFIKLFYYIQTKHGDIYDCVDFYKQPAFDHPLLKNHNFHPQPTSPPRRVSPEKEVPKPDYKHVKIGLEGGGCPMGTVPIRRTTKDDLIRAKLYSEMHASKINPLTDEEPGKHVSYNFFAVARTFENIDYDGVGAMLSVWNLPVQAPQYTLGRVKIKNGAESLEAGWTVNPVLYGGDNRTRMYIYTNAGQAHFSRYGEKPYGITLSIYQDTINLNWYLKYDDNRTVIGWWPSRIFTNLGSTATGAEWGGEVFSPPNVPSPGMGSGHRIKLDTNYDAFFAQANIVVNNTIIKPRKDLKLFTDSFNFDITNKGDVGGEPGYLILYGGVSGAIGN* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0405 355 Pfam Neprosin 215 348 IPR004314 -
Vvi2g0405 355 Pfam Neprosin 171 211 IPR004314 -
Vvi2g0405 355 MobiDBLite consensus disorder prediction 58 79 - -
Vvi2g0405 355 Pfam Neprosin activation peptide 33 124 IPR025521 -
Vvi2g0405 355 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 33 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0405 Vvi-Chr2 3392461 3394348 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0405 - - vvi:109124253 615.535