Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0396 ATGGGAGCAGAGGAAGCAAAGAAAGATACAAGTGAGGTAGCTACAGAGGACCAAGCTCAAGAGAAGAGTGTGATTCCACTGCCCGACCCTGTGGACAAGGTCTCTCGTTCAAAAACATCTGCCAATGTTGAAAAGGCAACAGACAACCCCAATGAGAAAAACTCAGGAGCAACGGCTGAAAGAGATGCTGTGCTTGCTGCAATCGAAACCGAGAAGAGGTTGGCCTTGATCAAAGCATGGGAAGAAAGCGAAAAGTCCAAAGCAGAGAACAGGGCACATAAAATGCAGTCGGCGACTGGAACATGGGAGAATAGCATGAAAGCATCTGCAGAGGCTCAACTGAAGAAGATGGAGGAAAAATTGGAGAAGAAGAAGGCAGAATATGGAGAGAGAATGAAGAACAAGATCGCTGAAATCCACAAGGCAACCGAAGAAAAGAGGGCAATGATTGAAGCCAAGCGCAGGGAAAATCTTCTCAAGATAGAGGAGGCAGCTGCCAAATACCGTGCGTCAGGAACTGCACCAAAGAAGCTTCATGGATGTCTCGGCAGCTTTGATTTTTAG 564 0.4699 MGAEEAKKDTSEVATEDQAQEKSVIPLPDPVDKVSRSKTSANVEKATDNPNEKNSGATAERDAVLAAIETEKRLALIKAWEESEKSKAENRAHKMQSATGTWENSMKASAEAQLKKMEEKLEKKKAEYGERMKNKIAEIHKATEEKRAMIEAKRRENLLKIEEAAAKYRASGTAPKKLHGCLGSFDF* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0396 187 PANTHER OS02G0117200 PROTEIN 4 182 - -
Vvi2g0396 187 MobiDBLite consensus disorder prediction 35 56 - -
Vvi2g0396 187 MobiDBLite consensus disorder prediction 83 109 - -
Vvi2g0396 187 MobiDBLite consensus disorder prediction 93 108 - -
Vvi2g0396 187 Pfam Remorin, N-terminal region 16 67 IPR005518 -
Vvi2g0396 187 MobiDBLite consensus disorder prediction 1 16 - -
Vvi2g0396 187 MobiDBLite consensus disorder prediction 1 62 - -
Vvi2g0396 187 Pfam Remorin, C-terminal region 72 177 IPR005516 -
Vvi2g0396 187 Coils Coil 107 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0396 Vvi-Chr2 3274791 3275789 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0396 - - vvi:100263385 346.665