Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0394 ATGTTCAAGTCGGCGAGATGGAGGAGCGAGAAGAGCAAGATCAAGGCTGTGTTCAAATTGCAGTTTCGTGCAACGCAGGTGCCTCAGTTAGGTGTGGAGGCATTGTTTCTATCTGTGGTTCCTGCGGATGTGGGAAAGCCGACAGTGAAATTAGAGAAAGCTTGGCTTGAAGGCGGAAGCTATTATTGGGAAAATGCGGTGTATGAAACAGTGAAATTCGTTCAGGACCCCAAGTCGGGGAAGATTAATGATAGAATCTACCATTTTATAGTCTCAAAGGGATCTTCAAAAGCAGGTCTTGTTGGAGAGGTTTCCATTGATTTTGCAGATTATGCTGAGGCAACAAAGCCTTCCTCTGTTTCTCTTCCCCTGAAGAATTCAAACTCTGGTGCAGTTTTGCATGTTTCCATTCAGAGGATACAGGGAAATGTTGATGAAAGAGAGGTTGAAGAAAGTGATGATGCCAAAATTAAGTCTCAGGATAAAATCTTGAGGAACCAATTAAGCAATGGTGATGCAGATGGAAGTGTCAAGAGTAATTCTGCTGAAGATGGTCCATTTAATAAAACCACATCCAACATGGAATTGAGCAGCAACCGCAGAGCATCGAGTGGATCTGACATTACACTATCAAGTTCTGAGAGCAGCTCTGGACTTGATACCCCAAGAGAAATTGTATCGAAGAATAATAACATCCATCAGAACCCTACCAGCTTTGTATCTTCTCTGAGCCACACCTCATTGCCTCATCAACCAACTACAAATACACTGGCCACAACATATCAAGAAGATCAGAGGTCACTATGTGAGTGGTCAGTGGCTTCTGATCAGGGAGTATGTACGGATGACTCAATAAACAGTTCTCAAGACATCCTTCCAGGAGAAAGGTCTCAACAGGCTCCAGATGTTGCAATTGAGAAACTCAAAACTGATTTTCTTGTTTTGGCCAGGCAGGCAGAAATGGCAGAGTTGGAATTACAGACTCTTCGAAAGCAAATTGTGAAGGAGAGGAAAAGGGGGCAGGATCTATCTAAAGAAGTTGGTGGCCTGAAAGAGGAGAGAGATGCACTGAAGGCAGAATGTGAAAACCTCAGATCCTTTCAGAAACGTACTGACCAGGCAAAAATAAAAAACAAGTTGCAGTTTGAGGGTGGGGATCCACGGGCTCTTCTTGAGGAACTGAGACAAGAACTAAGTTATGAAAAGGACCTGAACGCTAATCTTCGGTTGCAGCTTCAGAAGACTCAAGAATCAAACACTGAGCTGATCCTTGCTGTCCGTGACCTTGATGAAATGTTGGAGCAGAAAAATCTGGAAATATCCAATCTTTCTGACAAACTGGCAACCACTGAGAATGGGGAAGAACTGAGGGAAGCTACATCAAGATGCCAATCAGACGATGATGAAGAGCAAAAAGCACTTGAAGACCTCGTTAAGGAGCATAACGATGCCAAGGAAGTTTACTTGCTGGAGCAAAAGGTCATGGACCTCTACAGTGAAATAGAGATCTATAGGAGGGACAAAGATGAGTTGGAGGCACAGATGGAGCAGCTGGCTCTTGACTATGAGATATTGAAACAAGAAAACCATGATATTTCATATAGACTAGAGCAAAGCCAGCTGCAAGATCAACTGAAAATGCAGTATGAATGCTCAGCTTCTTTTGCTACCATGAACGAGCTTGAAAACCAGGTTGAGAAATTGGAAAATGAGCTCAAGAAGCAGTCAAGAGAATTCTCAGATTCTTTAGTCACCATAAGTGAACTTGAAACCCAAGTTCGGAACTTGGAAGAAGAACTGGAGAAACAAGCCCAGGAGTTTGAAGCTGATCTTGAAGTTATTACATCGGCCAAAGTTGAGCAGGAGCAGAGAGCCATCCGAGCAGAGGAAGCCTTGAGAAAGACAAGATGGCAAAATGCTAATACAGCTGAGAAGCTTCAGGAAGAATTTAAAAGGCTCTCCAAGCAAATGACATCTACTTTTGATGCAAATGAGAAGGTGGCCATGAAAGCAATGGCAGAAGCCAGTGAATTGCGAATGCAGAACTGTCATTTGGAAGAAATGCTTCAGAAAGCTAATGAAGACCTCCAGTCAATTAGAGATGATTATGAAGCAAAACTGCAAGATCTTTGCAACCAATTGAATTTGAAGACAAGCCAGTTGGAACAGCTTCTGTTGGAAACTGAGGATAAATCCAAGCAGCTCAAACATCAAGAAAAGCATGAGCAGGAATTTCATGGAGTTCTCTCACAGGAGATCATTACACTCATGGCTGAGATAGAAAGGCTCACAGAAGAGAATGGTTTACTTTCTGAACTGGCAGAACAGAATGAAAGTTTGAGAGCAGAGTTTCAACAGATAAAGATGTCAGCAAAGAAAACTGAGATGCTGGTACAAAGAGGGATAATGGAAAGAAGTGAACTTGAAAAGACAATTGCTTTGCTGCGGAAGGAAGCAGAAAAGTTGCTGGAGGAACTAAATGGTATGACATATCTAAAGGATGAAAAGGAGACCCTACTTGGAAATTTACAAGCTGAGTTGGAAAACCTTAGAGCTCGATATAATGAAATGAAACGTTCTTTGTTTGAGGATGAGACTGAGAAAGAGAAACTCAGGAAGCAGGTTTTTCAACTAAAGAATGAACTCAAGAAGAAGGAAGACGCATTCAACACTGTTGAGAAGAAGCTCAAGGATAGCAATGGACGTGGCCCTATTTCTGATGGAACAAAAGCGACTCCAAAAAACAATAAAGCTGCTCCAGTTCCTCGTGGCTCTAAAGAGGTTGCAAGTCTGAAGGAGAAAATAAAATGGCTCGAGGGACAAATAAAGCTTAAGGAAACTGCTCTAGAAAGCTCAACTAATTCATTTTTGGAGAAGGAAAAGGACCTTCAGAATAAAATTGAAGAACTGGAAAGCAGAATGGAAGATCTCAACCAAAGTAGCAAAAGCTTTTGTGAATACCAACTCCAAAAGGTAGCTTTGAATGGTGATATGCCTGGAGAAATAAGAAGTGCGGCTGAAAATTTGACCACTACAGCATTAATGTCCAAAGAAAATGGGATGGGGATGCCGCTAATTGAGAGTAAGGATGAAATTTTATTGGAGGAACAACCCAAAGCCTCTGCTATGACCATAAGAGAACAATTTGAACTTGATGATTTGTTAATGGAAATGACATCATTGAAGGAAAAGAACAAATCCATGGAAGGTGAACTGAAGGAAATGCAAGAGAGATATTCAGAGATAAGTCTCAAGTTTGCTGAGGTAGAAGGGGAAAGGCAACAGCTGGTAATGACAGTTCGCAACCTCAAGAATGCTAAGAAGGGCTAA 3330 0.4183 MFKSARWRSEKSKIKAVFKLQFRATQVPQLGVEALFLSVVPADVGKPTVKLEKAWLEGGSYYWENAVYETVKFVQDPKSGKINDRIYHFIVSKGSSKAGLVGEVSIDFADYAEATKPSSVSLPLKNSNSGAVLHVSIQRIQGNVDEREVEESDDAKIKSQDKILRNQLSNGDADGSVKSNSAEDGPFNKTTSNMELSSNRRASSGSDITLSSSESSSGLDTPREIVSKNNNIHQNPTSFVSSLSHTSLPHQPTTNTLATTYQEDQRSLCEWSVASDQGVCTDDSINSSQDILPGERSQQAPDVAIEKLKTDFLVLARQAEMAELELQTLRKQIVKERKRGQDLSKEVGGLKEERDALKAECENLRSFQKRTDQAKIKNKLQFEGGDPRALLEELRQELSYEKDLNANLRLQLQKTQESNTELILAVRDLDEMLEQKNLEISNLSDKLATTENGEELREATSRCQSDDDEEQKALEDLVKEHNDAKEVYLLEQKVMDLYSEIEIYRRDKDELEAQMEQLALDYEILKQENHDISYRLEQSQLQDQLKMQYECSASFATMNELENQVEKLENELKKQSREFSDSLVTISELETQVRNLEEELEKQAQEFEADLEVITSAKVEQEQRAIRAEEALRKTRWQNANTAEKLQEEFKRLSKQMTSTFDANEKVAMKAMAEASELRMQNCHLEEMLQKANEDLQSIRDDYEAKLQDLCNQLNLKTSQLEQLLLETEDKSKQLKHQEKHEQEFHGVLSQEIITLMAEIERLTEENGLLSELAEQNESLRAEFQQIKMSAKKTEMLVQRGIMERSELEKTIALLRKEAEKLLEELNGMTYLKDEKETLLGNLQAELENLRARYNEMKRSLFEDETEKEKLRKQVFQLKNELKKKEDAFNTVEKKLKDSNGRGPISDGTKATPKNNKAAPVPRGSKEVASLKEKIKWLEGQIKLKETALESSTNSFLEKEKDLQNKIEELESRMEDLNQSSKSFCEYQLQKVALNGDMPGEIRSAAENLTTTALMSKENGMGMPLIESKDEILLEEQPKASAMTIREQFELDDLLMEMTSLKEKNKSMEGELKEMQERYSEISLKFAEVEGERQQLVMTVRNLKNAKKG* 1110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0394 1109 Coils Coil 494 528 - -
Vvi2g0394 1109 Coils Coil 805 825 - -
Vvi2g0394 1109 Coils Coil 426 453 - -
Vvi2g0394 1109 Coils Coil 953 980 - -
Vvi2g0394 1109 MobiDBLite consensus disorder prediction 450 468 - -
Vvi2g0394 1109 Coils Coil 391 411 - -
Vvi2g0394 1109 ProSiteProfiles C2 NT-type domain profile. 6 141 IPR019448 -
Vvi2g0394 1109 Coils Coil 833 895 - -
Vvi2g0394 1109 Coils Coil 551 624 - -
Vvi2g0394 1109 Coils Coil 763 790 - -
Vvi2g0394 1109 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 11 142 IPR019448 -
Vvi2g0394 1109 MobiDBLite consensus disorder prediction 144 254 - -
Vvi2g0394 1109 PANTHER MYOSIN HEAVY CHAIN-RELATED PROTEIN 1 1108 - -
Vvi2g0394 1109 Coils Coil 686 738 - -
Vvi2g0394 1109 MobiDBLite consensus disorder prediction 449 468 - -
Vvi2g0394 1109 MobiDBLite consensus disorder prediction 162 254 - -
Vvi2g0394 1109 MobiDBLite consensus disorder prediction 144 161 - -
Vvi2g0394 1109 Coils Coil 1051 1092 - -
Vvi2g0394 1109 MobiDBLite consensus disorder prediction 893 925 - -
Vvi2g0394 1109 Coils Coil 319 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0394 Vvi-Chr2 3250592 3255459 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0394 - - vvi:100261513 2082.37