Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0393 ATGGCCAAGGTCCACCCTCAAACATTTACTGCTGCTCCTCTTTCTCCACCTTCTGATTCTTGTATCACTTCAAAGAGAGAAGCATTCACTATATGGATGAAGTCACTTGTCATACAAGGAAATGGATGCACTGTCTTCAATTCAGATGGGGAGATTGTTTATAGAATTGATAATTATGATAAGAAGTGCAGCAGCGAAGTTTATCTCATGGATCTTCAAGGCAAAGTTCTCTTCACCATACTTCAAAGGAAACTCCGTGTTTTTGGAAGATGGGAGGGGTATAAAAGCAATGGTTCAAAAGGGAACAATCAGAAGCCATGGTTTCAAGTTAGAAAAAATTGCAGAATTCTGGGAGGAGGTTCATCATGTCAAGTGACTGTGAGGCCTAATGAAGCTCAATCATATTGCTACAGAATACAAGGCCTGACTGGTAAATCAGCATTCAAGATAGTAGACAGCCAAGGAGGACTTCTTGCAGAGGTAGAGCAAAAACAAACATCTTCAGGGGTAGTGTTGGGAGAAGATGTACTAAACTTGGTGGTGGAGCCCCATGTTGATCATTCCCTTGTCATGGCTCTTGTGGCAGTATATGGACTGATCCACCATAGAATAAATTTCTCATGCCTGGCATAA 633 0.4155 MAKVHPQTFTAAPLSPPSDSCITSKREAFTIWMKSLVIQGNGCTVFNSDGEIVYRIDNYDKKCSSEVYLMDLQGKVLFTILQRKLRVFGRWEGYKSNGSKGNNQKPWFQVRKNCRILGGGSSCQVTVRPNEAQSYCYRIQGLTGKSAFKIVDSQGGLLAEVEQKQTSSGVVLGEDVLNLVVEPHVDHSLVMALVAVYGLIHHRINFSCLA* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0393 210 PANTHER - 27 202 IPR007612 -
Vvi2g0393 210 Pfam LURP-one-related 18 196 IPR007612 -
Vvi2g0393 210 SUPERFAMILY Tubby C-terminal domain-like 18 202 IPR025659 -
Vvi2g0393 210 Gene3D - 18 204 IPR038595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0393 Vvi-Chr2 3248584 3249811 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0393 - - vvi:100256427 416.001