Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0392 ATGGCCAAGGTCCACCCTCAAATGCCTGCTGCTGTTCCTCCTCCTCCTCCTCCACCTTCTGATTCTTGTATCACTTCAAGGAGGGAGACTTTTACTCTATGGATGAAATCACTTGTCATACAAGGAAATGGATACACTGTCTTCAATTCTGATGGTGAGATTGTTTACCGTATTGATAATTATGACAAGAAGTGCAGCAGTGAAGTTTATCTCATGGATCTTCAAGGCAAAGTTCTCTTCACCATACTTCAAAGGAAACTACATGTTTTTGGAAGATGGGAGGGGTATAAATGCAATGGTTCAAAGGCGGACAGTCAGAAGCCATGTTTTCAAGTCAGAAAACATTGCAGAATTCTGGGAGGAGGTTCATCATGTGAAGTTACAGTGAGGCCTAATGAAGCTCAATCATGTTATTACAGAATACAGGGCTTGGCTGGTAAATCAACATTCAAGATTGTAAACAGTGAAGGAGGAGTCATGGCAGAGGTAAAGCAAAAGCAAACATCTTCAGGAGTAGTGTTGGGAGATGATGTGCTGAACTTGGTGGTGGAGCCCCATGTTGATCATTCCCTTGTCATGGCTCTTGTGGCAGTGTGTGGATTGATCCACCACAGAATGTGA 621 0.4316 MAKVHPQMPAAVPPPPPPPSDSCITSRRETFTLWMKSLVIQGNGYTVFNSDGEIVYRIDNYDKKCSSEVYLMDLQGKVLFTILQRKLHVFGRWEGYKCNGSKADSQKPCFQVRKHCRILGGGSSCEVTVRPNEAQSCYYRIQGLAGKSTFKIVNSEGGVMAEVKQKQTSSGVVLGDDVLNLVVEPHVDHSLVMALVAVCGLIHHRM* 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0392 206 MobiDBLite consensus disorder prediction 8 22 - -
Vvi2g0392 206 MobiDBLite consensus disorder prediction 1 22 - -
Vvi2g0392 206 SUPERFAMILY Tubby C-terminal domain-like 16 204 IPR025659 -
Vvi2g0392 206 PANTHER - 29 203 IPR007612 -
Vvi2g0392 206 Pfam LURP-one-related 20 198 IPR007612 -
Vvi2g0392 206 Gene3D - 20 206 IPR038595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0392 Vvi-Chr2 3242225 3242957 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0392 - - vri:117930765 396.356