Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0390 ATGACTGTGATTCAAAATATGCAGCGCTTCTCTACTGCAATCTTGCAGAGGTCTCAACTGGGCAGAGATTTTTCTGGGTTGAGAATTTTTCGTCTGCCATTAATGAAGAAAGCACCTGCAGCTTGCAGTATTACTATCTATACGTTTTTCCTCTTCTTCATTCTCTTTGTTGCAGCTGCCTTCATCTCTTTTTTCTGCTTCAGCAGCCGTTTTATCTTTCTGGTTAATAATTCTGAGCGCAAAGCAGTACCAATCTCTGAAAATCACCGGAAAACGCCGAGGCCAATTGTAGTCCCACTCAACTGCTCCGCCAGGAATCTCACTCAAACCTGCCCAGGAAATTACCCAACAACATTTGATACAGACTTGGCATGGAAACCTGTTTGCCCAGATTACTTTAGATGGATCCATGAAGATTTGAAGCCATGGAAGACCACAGGGATTAGTAGGGATATGGTGGAGAGAGCTAAGAGGAGTGCCCATTTCAGACTGGTTATTGTGAAGGGCAAAGTGTACATAGAGAAGTACAAGAAGTCGATACAGACTAGAGATGTGTTCACAATATGGGGTATTCTGCAACTTCTCAGAAGGTACCCCGGAAAGTTACTGGACTTGGAGCTGACGTTTGACTGCAATGACAGGCCGGTGATCAGATCAGGCGACCACCGTGGACCCAACTCGACGAGCCCACCACCTCTGTTTCGCTACTGTGGGGATCGGTGGACTTTGGATGTGGTGTTTCCTGACTGGTCCTTCTGGGGTTGGCCTGAGATTAATATGAAGCCATGGGGGAATTTATTGAAGGACCTAAAAGAAGGCAACAACAGGACCAAATGGATGGAAAGGGAACCATATGCCTACTGGAAGGGAAACCCTTTAGTAGCTGAAACCCGGAGAGACCTCCTTACTTGCAATGTCTCTGATGTACAGGACTGGAATGCTCGACTATTTGTCCAGGACTGGATGCTTGAATCTCAACAAGGATATAAGCAATCAGATGTATCAAACCAGTGCACTCATAGATACAAGATCTACATTGAAGGGTGGGCATGGTCTGTCAGTGAGAAATACATTCTTGCTTGTGATTCTGTTACATTGATGGTGAAGCCTCGTTACTATGATTTCTTCATGAGAAGTCTGCAACCCGTGCACCACTACTGGCCTATTAAGGACAACGACAAGTGCAGATCCATTAAGTTTGCTGTGGACTGGGGCAACAGCCATAAGCAGAAGGCACAAGCCATTGGGAAAGCGGCAAGCGACTTTATTCAAGAAGAGCTCAAGATGGACTATGTCTATGACTACATGTTTCATCTATTGAATGAGTATGCAAAGCTTTTGCGATTCAAGCCGACCATACCTGAGGGAGCTGTGGAAGTCTGCTCTGAGACAGTGGCATGCTCTGCAGAAGGGGTAGAGAAGAAATTCATGATGGAATCCTTGGTGAATAGTCCTTCTGTTACAAGCCCATGCGCCCTGCCCCCTCCCTATGATCCTCCAGTCCTTGGAGCATTGCTTAGGAAGAAAGCCAACTCCATAAAGCAAGTGGAGAGATGGGAGAATAGGTATTGGGAGAATTTAAATCAGCAGCATTAG 1596 0.458 MTVIQNMQRFSTAILQRSQLGRDFSGLRIFRLPLMKKAPAACSITIYTFFLFFILFVAAAFISFFCFSSRFIFLVNNSERKAVPISENHRKTPRPIVVPLNCSARNLTQTCPGNYPTTFDTDLAWKPVCPDYFRWIHEDLKPWKTTGISRDMVERAKRSAHFRLVIVKGKVYIEKYKKSIQTRDVFTIWGILQLLRRYPGKLLDLELTFDCNDRPVIRSGDHRGPNSTSPPPLFRYCGDRWTLDVVFPDWSFWGWPEINMKPWGNLLKDLKEGNNRTKWMEREPYAYWKGNPLVAETRRDLLTCNVSDVQDWNARLFVQDWMLESQQGYKQSDVSNQCTHRYKIYIEGWAWSVSEKYILACDSVTLMVKPRYYDFFMRSLQPVHHYWPIKDNDKCRSIKFAVDWGNSHKQKAQAIGKAASDFIQEELKMDYVYDYMFHLLNEYAKLLRFKPTIPEGAVEVCSETVACSAEGVEKKFMMESLVNSPSVTSPCALPPPYDPPVLGALLRKKANSIKQVERWENRYWENLNQQH* 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0390 531 Pfam Glycosyl transferase family 90 126 520 IPR006598 -
Vvi2g0390 531 PANTHER KDEL LYS-ASP-GLU-LEU CONTAINING - RELATED 106 524 - -
Vvi2g0390 531 SMART cap10 201 450 IPR006598 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0390 Vvi-Chr2 3227601 3231637 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0390 - - vvi:100263289 1096.26