Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0386 ATGGAAGCAGAGAATGAAATAAGGAGTAAGAGGTATGCTGCTGACATTTCCTCCATACGAGAAGCACAAGTGCGGATCAACTCATTCATACACAAAACTCCAGTTTTGACTTCAGAAACCCTCAATTCTCTTGCTGGGAGGGGGCTATTTTTTAAATGTGAATGTTTTCAGAAGGGTGGAGCCTTCAAATTTAGAGGTGCCTGCAATGCTATTTTTTCACTCGATGATGAGCAGGCAGCCAAAGGGGTTGTAACTCACAGCAGTGGGAATCATGCTGCAGCATTGTCTCTGGCTGCAAAACTTCGGGGGATTCCGGCATATATAGTTATACCAGAAAATGCTCCAAGATGCAAAGTTGAGAATGTCATACGTTACGGTGGCCAGGTTATCTGGAGCAGGGCCACAATGCAGTCAAGGGAAGATATTGCTACCAGGGTGTTGCAAGAAACTGGTGCTGTTCTTCTTCATCCATATAATGATGGGCGCATTATAAGTGGGCAGGGTACCGTATCACTGGAACTTCTGGAGCAAGCCCCACAAATAGACACTATAATGGTTCCAATAAGCGGAGGTGGTTTGATATCAGGGGTGGCATTGGCTGCTAAGTCCATCAACCCTTCCATTCGAGTATTTGCTGCTGAGCCGAAGGGAGCTAATGATGCAGCTCAATCAAAAAATGCTGGCAGGATTATAACATTGCCTGAGACCAACACCATTGCTGATGGGCTTCGAGCTTCTCTTGGAGATCTTACCTGGCCTGTAGTACGAGATCTCGTTGATGATATCATAGTCGTGGAGGATAAGGAGATAATCGAAGCCATGAAACTCTGTTATGAGATTCTGAAGGTTGCAGTAGAGCCTAGTGGAGCTATAGGTCTTGCCGCGGTTCTGTCTGACAGTTTCAAGAAAAATCCTGCTTGGAAGAACTGCAGGAACGTTGGAATTGTACTTTCGGGGGGCAATGTTGATCTGGGTGTGCTTTGGGATTCATTGGGTAAATAA 1002 0.4561 MEAENEIRSKRYAADISSIREAQVRINSFIHKTPVLTSETLNSLAGRGLFFKCECFQKGGAFKFRGACNAIFSLDDEQAAKGVVTHSSGNHAAALSLAAKLRGIPAYIVIPENAPRCKVENVIRYGGQVIWSRATMQSREDIATRVLQETGAVLLHPYNDGRIISGQGTVSLELLEQAPQIDTIMVPISGGGLISGVALAAKSINPSIRVFAAEPKGANDAAQSKNAGRIITLPETNTIADGLRASLGDLTWPVVRDLVDDIIVVEDKEIIEAMKLCYEILKVAVEPSGAIGLAAVLSDSFKKNPAWKNCRNVGIVLSGGNVDLGVLWDSLGK* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0386 333 Gene3D - 62 158 IPR036052 -
Vvi2g0386 333 Pfam Pyridoxal-phosphate dependent enzyme 28 319 IPR001926 -
Vvi2g0386 333 Gene3D - 25 323 IPR036052 -
Vvi2g0386 333 FunFam L-threonine dehydratase catabolic TdcB 142 323 - -
Vvi2g0386 333 SUPERFAMILY Tryptophan synthase beta subunit-like PLP-dependent enzymes 16 325 IPR036052 -
Vvi2g0386 333 ProSitePatterns Serine/threonine dehydratases pyridoxal-phosphate attachment site. 54 67 IPR000634 GO:0006520|GO:0030170
Vvi2g0386 333 PANTHER SERINE / THREONINE RACEMASE FAMILY MEMBER 6 326 - -
Vvi2g0386 333 CDD Thr-dehyd 16 323 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0386 K12235 - vvi:100247899 634.795