Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0380 ATGAACAACCTTAAGCTGGGGGTAGATGTGGTTAGTGCACACAATCTTATGCCTAAAGATGGGCAAGGGTCATCTAGTGCCTTTGTAGAGCTCTACTTTGATGGTCAGAAGTTCCGAACCACTATCAAAGAAAAGGATCTCAACCCTGTTTGGAATGAAAGCTTCTATTTCAACATCTCCGATCCTTCCAACCTCCATTACCTCACTCTTGATGTCTACATCTATAATAACACAAAGGCTACCAACTCCAGGTCCTTCCTTGGGAAAGTTTCCCTAACTGGGACTTCATTTGTCCCATACTCTGATGCTGTTGTCCTGCACTATCCTGTGGAGAAACGGGGCATCTTCTCACGTGTAAGAGGGGAGCTTGGCCTTAAAGTTTATATCACAGATGATCCTTCAATAAAGTCCTCTATCCCAGTTCCTTCAGTTGAATCTACACATAAAGATGCAAGCCTAACTCATGACCAAACAGTTCCCAATCCAGTCCCAACTGGCAGTGAGAAAGCAGAGGCAAGACACACCTTCCATCATCTCCCTAACCCAAATCATCCCCAACATCAGCACCAGTCTTTTCCGGTAGCAGTCCATCAAGCAACAAAATATGGGGTTGATGAGATGAAATCTGAACCACAGCCTCCAAAGCTTGTTCGCATGTACTCTTCATCACCAGCACAACCTGTTGATTTTGCACTTAAAGAGACGAGTCCATTCCTTGGAGGAGGACAAGTTGTCAGGGGTCGTGTTATTCGTTCAGACAAGACTGCAAGCACTTATGATCTTGTTGAACAAATGCAGTTCCTCTTTGTAAGGGTTGTTAAGGCTCGGGAGCTTCCTGCTATGGATGTTACTGGGAGTCTTGATCCATATGTTGAGGTGAAAATTGGAAACTATAAAGGAGTTACAAAGCACATGGAGAAGAAGCAAAATCCAGAGTGGAATGTAGTGTTTGCCTTTTCGAGGGATCGGATGCAAGCTTCTGTACTAGAAGTAGTGGTTAAGGACAAGGATCTGGTAAAAGATGACTTTGTAGGCAGGGCAAGGTTTGACCTCAATGAGGTTCCTATGCGGGTTCCGCCTGATAGCCCACTGGCTCCAGAATGGTACCGGCTAGAGGACAAGAAGGGGGAGAAGATCAAGGGTGAGCTGATGCTTGCAGTCTGGATTGGCACCCAAGCAGATGAGGCTTTTCCTGATGCATGGCATTCTGATTCAGCTACACCCGTTGACAGCTCAGCAGCTGCCTCTACTCTGATCCGTTCAAAGGTTTATCATGCACCACGGTTATGGTATGTGCGTGTTAACATTATTGAGGCACAAGATTTGGTCCCAACAGAGAAGAATCGTTTCCCAGATGTGTATGTCAAGGTACATATAGGAAACCAGGTCATGAAGACAAAGACAGTTCAGGCTCGGTCACTGACCACACTCTGGAATGAGGATCTTTTATTCGTTGCTGCCGAACCCTTTGAAGATCATCTGATACTTTCAGTCGAGGATCGTGTGGGTCCTGGAAAAGACGAGATCCTGGGAAGGGTCATCATACCATTGAGCACAGTAGATAGGCGTGCTGATGATCGAATGATCCATTCCCGGTGGTATAACCTGGAAAAGCCCATAGCTGTAGACGTGGATCAATTGAAGAAAGAGAAATTCTCTAGCAGGCTCCATCTTCAAGTTTGTCTAGATGGAGGTTACCATGTTCTTGATGAGTCAACTCACTATAGCAGTGACCTCCGCCCCACGGCAAAACAGCTCTGGAAGCCATCCATTGGGGTTTTAGAGCTTGGCATCCTGAATGCTGTAGGTCTTCACCCCATGAAAACAAGAGATGGGAAGGGCACATCAGATACCTACTGTGTGGCCAAGTATGGTCACAAATGGATCAGAACACGAACTATTGTGGATAACCTTTGTCCAAGATACAATGAGCAGTACACATGGGAGGTTTTTGATCCAGCTACAGTTCTCACTGTAGGTGTTTTTGACAATAGCCAGCTTGGGGAAAAGGGTTCAAATGGTAACAAAGACCTGAAAATTGGGAAGGTTCGGATTCGTATTTCTACCCTGGAAACAGGCCGTGTTTATACTCACTCTTATCCCCTGTTGGTTCTTCACCCAAGTGGCGTCAAGAAGATGGGAGAGCTGCATATGGCAATCCGATTTTCCTGCACATCTTTTGTAAACATGCTTTATATTTACTCACGACCCTTGTTACCAAAAATGCACTATGTAAGGCCCTTTTCTGTGATGCAGCTTGATATGCTACGACACCAAGCTGTCAACATAGTGGCAGCAAGGTTAGGTCGAGCAGAGCCCCCACTCCGGAAGGAGGTGGTGGAATACATGTCGGATGTGGATTCACACCTTTGGAGCATGCGGCGGAGCAAGGCAAATTTCTTCCGGCTAATGTCAATTTTCTCGGGATTATTTGCAGTAGGGAAATGGTTTGGTGATATCTGCATGTGGAGGAACCCCATCACAACAGTGCTAGTGCATGTGCTCTTTCTCATGCTTGTTTGCTTCCCAGAACTAATCTTACCCACCGTCTTCCTCTATATGTTTCTGATAGGGGTATGGAACTTCCGCTACCGGCCAAGGTACCCTCCACATATGAACACAAGGATCTCACAAGCTGATGCAGTGCACCCTGATGAACTTGATGAGGAGTTCGACACATTTCCAACAAGCCGGAGCCCAGAGCTGGTGAGATTGAGGTATGATCGCCTGAGGAGCGTGGCTGGTAGGATTCAGACTGTGGTGGGTGATGTAGCGACTCAGGGAGAGCGAGTTCAGTCTCTGTTAAGCTGGCGAGATCCACGAGCTACCGCCATCTTTGTTACTTTCTGTCTGGTAGCAGCACTGGTATTGTATGTGACACCATTCCAGGTCATAGCAGCCTTGGCAGGATTCTACATGATGAGACATCCCAGATTTCGCTACAGGTTGCCATCAGCACCAATCAACTTCTTCCGTCGCCTGCCCGCCAGGACTGATAGTATGTTATGGAACCACCCCCGAGTAGAAAACCAGGAGCAAAACTTAGAAGAAACAATTTTGTCACCAGAAATGGCCATTTCTGTGTCCAAGAAGAGATCTAGACTACCCAAAAAGGCAGAAGCAGAAGAACTTGGTTCCTTCATTTCAGTTCTATCCAAACTTCTATGTAGAATCCCTGCGGTGCTTCTCGTTTTAGTCCTTCTCTTCCTATGGTCTTCTTCCACCACCATTATCTCCGGGAACATTGTCCACGTGTGCGTGTCTTCCCGGAGGCTTAACAACCTCTACTGCCTCTCTGCTGGAACCCAACCTAATTTTGAAATCCCAGTTTCGATCGTCCACAATACTTCTAGTAGTACTAGTACTACTCCAGAGATGGTGGATGTTTTTGTTGAAAACCCGGTTCCAATTGCAGATAACAGCACTGGAAATGAAAGAGATGAGGTTGAGAATGCTGTTAAGATAGTTGAAGAGCAGCTTCGGGCACATCGATCCTGGACGGCAAATGGGAATACTGGTGACTGCAATGGGAGGGGGGTGTTTGTGTATGATCTGCCACCAAAGTTCAATAAAGAGTTGGTGGATCACTGTTATGATATGATTCCATGGATGGACTTCTGTAAATATTTGAGCAACGAGGCGTTGGGAGAGCCGATACTGAAGCTTGGAAAGGGATGGCACCAGACTCATCAGTATTCTCTGGAACCAATATTTCATTCCAGGGTTTTGAAGCATCCTTGTAGGGTTTACAATCAGAATGAAGCAAAGCTCTTCTATGTCCCATTCTATGGTGGACTAGACATCCTGCGATGGCACTTCAAGAATGTTTCCAGTGATGTCAAGGACACCTTGGGGTTAGAACTCATACAGTGGCTTGAGTCTCAGCAGCCATGGATTCGAAATTCAGGTAAGGACCATGTGTTTGTTTTAGGCAAAATCTCTTGGGATTTCAGGAGGAATAACAAAATTTCATGGGGGACTAGATTTCTAGAGCTTGATCAAATGCAGAACCCAATAAAGCTCTTGATAGAGAGACAACCATGGCATATGAACGACATTGGCATCCCACATCCTACTCACTTCCACCCCCATTCAGACGACGATATCATCACATGGCAGCTCAAAATCATGCGGTCCAAGCGCAAAAACCTAGTGAGTTTTGCAGGCGCTGCAAGGCCAGGTGCACCAGAAAACATAAGGTCGATACTGATCAAACAGTGCACTTCATCAGATACCGGAAAATGCCAGTTTCTGAACTGCGATTCAGGTGATTGTCGTCAGCCTGAATCTATCATTGAGCTGTTCATGGAGTCGGAATTCTGCTTACAGCCTCCTGGAGACAGCCCCACAAGAAAATCAGTATTTGACTCTCTGGTATCAGGCTGCATCCCAGTTCTGTTCGATTCATTCACAGCATACTACCAGTATCCATGGCATTTACCAGAGGATCATACCAGGTATTCAGTGTTCATAGACCAAGAAGATGTGAGATCAATGAAGATGAATGTGGTGGAGAGGCTGATGAAGGTTTCAGTGAGGGAAAGAGAGGACATGAGGAGATACATTGTGTATGAACTGTTGCCTGGATTGGTGTATGGAGATTCAAGTTCTGAGTTTGACAAGTTCCAGGATGCATTTTCCATCAGCATGAACAACCTTCTCGAAAGGATCAGCAGATTGGATTCAACTTCTGTAAATTAA 4701 0.4591 MNNLKLGVDVVSAHNLMPKDGQGSSSAFVELYFDGQKFRTTIKEKDLNPVWNESFYFNISDPSNLHYLTLDVYIYNNTKATNSRSFLGKVSLTGTSFVPYSDAVVLHYPVEKRGIFSRVRGELGLKVYITDDPSIKSSIPVPSVESTHKDASLTHDQTVPNPVPTGSEKAEARHTFHHLPNPNHPQHQHQSFPVAVHQATKYGVDEMKSEPQPPKLVRMYSSSPAQPVDFALKETSPFLGGGQVVRGRVIRSDKTASTYDLVEQMQFLFVRVVKARELPAMDVTGSLDPYVEVKIGNYKGVTKHMEKKQNPEWNVVFAFSRDRMQASVLEVVVKDKDLVKDDFVGRARFDLNEVPMRVPPDSPLAPEWYRLEDKKGEKIKGELMLAVWIGTQADEAFPDAWHSDSATPVDSSAAASTLIRSKVYHAPRLWYVRVNIIEAQDLVPTEKNRFPDVYVKVHIGNQVMKTKTVQARSLTTLWNEDLLFVAAEPFEDHLILSVEDRVGPGKDEILGRVIIPLSTVDRRADDRMIHSRWYNLEKPIAVDVDQLKKEKFSSRLHLQVCLDGGYHVLDESTHYSSDLRPTAKQLWKPSIGVLELGILNAVGLHPMKTRDGKGTSDTYCVAKYGHKWIRTRTIVDNLCPRYNEQYTWEVFDPATVLTVGVFDNSQLGEKGSNGNKDLKIGKVRIRISTLETGRVYTHSYPLLVLHPSGVKKMGELHMAIRFSCTSFVNMLYIYSRPLLPKMHYVRPFSVMQLDMLRHQAVNIVAARLGRAEPPLRKEVVEYMSDVDSHLWSMRRSKANFFRLMSIFSGLFAVGKWFGDICMWRNPITTVLVHVLFLMLVCFPELILPTVFLYMFLIGVWNFRYRPRYPPHMNTRISQADAVHPDELDEEFDTFPTSRSPELVRLRYDRLRSVAGRIQTVVGDVATQGERVQSLLSWRDPRATAIFVTFCLVAALVLYVTPFQVIAALAGFYMMRHPRFRYRLPSAPINFFRRLPARTDSMLWNHPRVENQEQNLEETILSPEMAISVSKKRSRLPKKAEAEELGSFISVLSKLLCRIPAVLLVLVLLFLWSSSTTIISGNIVHVCVSSRRLNNLYCLSAGTQPNFEIPVSIVHNTSSSTSTTPEMVDVFVENPVPIADNSTGNERDEVENAVKIVEEQLRAHRSWTANGNTGDCNGRGVFVYDLPPKFNKELVDHCYDMIPWMDFCKYLSNEALGEPILKLGKGWHQTHQYSLEPIFHSRVLKHPCRVYNQNEAKLFYVPFYGGLDILRWHFKNVSSDVKDTLGLELIQWLESQQPWIRNSGKDHVFVLGKISWDFRRNNKISWGTRFLELDQMQNPIKLLIERQPWHMNDIGIPHPTHFHPHSDDDIITWQLKIMRSKRKNLVSFAGAARPGAPENIRSILIKQCTSSDTGKCQFLNCDSGDCRQPESIIELFMESEFCLQPPGDSPTRKSVFDSLVSGCIPVLFDSFTAYYQYPWHLPEDHTRYSVFIDQEDVRSMKMNVVERLMKVSVREREDMRRYIVYELLPGLVYGDSSSEFDKFQDAFSISMNNLLERISRLDSTSVN* 1567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0380 1566 ProSiteProfiles C2 domain profile. 249 369 IPR000008 -
Vvi2g0380 1566 CDD C2A_MCTP_PRT_plant 5 131 - -
Vvi2g0380 1566 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 592 726 IPR035892 -
Vvi2g0380 1566 FunFam C2 domain-containing protein 417 562 - -
Vvi2g0380 1566 FunFam C2 calcium/lipid-binding plant phosphoribosyltransferase family protein 2 129 - -
Vvi2g0380 1566 ProSiteProfiles C2 domain profile. 575 700 IPR000008 -
Vvi2g0380 1566 MobiDBLite consensus disorder prediction 140 162 - -
Vvi2g0380 1566 Pfam C2 domain 593 702 IPR000008 -
Vvi2g0380 1566 Pfam C2 domain 430 536 IPR000008 -
Vvi2g0380 1566 Pfam C2 domain 5 93 IPR000008 -
Vvi2g0380 1566 Pfam C2 domain 268 362 IPR000008 -
Vvi2g0380 1566 Pfam Exostosin family 1175 1500 IPR040911 -
Vvi2g0380 1566 Gene3D C2 domain 1 130 IPR035892 -
Vvi2g0380 1566 PANTHER PHOSPHORIBOSYLANTHRANILATE TRANSFERASE ISOFORM 1 5 1002 IPR047259 -
Vvi2g0380 1566 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 430 583 IPR035892 -
Vvi2g0380 1566 Gene3D C2 domain 569 723 IPR035892 -
Vvi2g0380 1566 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 268 406 IPR035892 -
Vvi2g0380 1566 CDD C2C_MCTP_PRT_plant 431 581 IPR047258 -
Vvi2g0380 1566 Gene3D C2 domain 249 389 IPR035892 -
Vvi2g0380 1566 Gene3D C2 domain 415 561 IPR035892 -
Vvi2g0380 1566 Pfam Plant phosphoribosyltransferase C-terminal 847 1002 IPR013583 -
Vvi2g0380 1566 ProSiteProfiles C2 domain profile. 1 108 IPR000008 -
Vvi2g0380 1566 ProSiteProfiles C2 domain profile. 410 534 IPR000008 -
Vvi2g0380 1566 SMART C2_3c 5 106 IPR000008 -
Vvi2g0380 1566 SMART C2_3c 593 699 IPR000008 -
Vvi2g0380 1566 SMART C2_3c 267 363 IPR000008 -
Vvi2g0380 1566 SMART C2_3c 431 529 IPR000008 -
Vvi2g0380 1566 FunFam C2 domain-containing protein 575 726 - -
Vvi2g0380 1566 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 5 139 IPR035892 -
Vvi2g0380 1566 FunFam C2 domain-containing protein 262 406 - -
Vvi2g0380 1566 CDD C2B_MCTP_PRT_plant 267 391 IPR047257 -
Vvi2g0380 1566 CDD C2D_MCTP_PRT_plant 593 719 IPR047255 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0380 Vvi-Chr2 3144644 3151101 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0380 169 1002 Lipid Metabolism Gene Families AT4G11610 76.643 0.0 1386
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0380 - - vvi:100264973 1996.86