Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0379 ATGGCAAGCCAATCCAGTCCGCAATCAGTCCACAGCTTCACCGTTAAGGATGCTAGGGGAAATGATGTTGATCTTAGCATCTACAAGGGAAAAGCCCTCTTGATTGTCAATGTTGCATCACAATGTGGCTTGACCAATTCAAACTACACAGAGCTGCATCAGTTGTATGAGAAATACAAAGATCAAGGTTGTTTGGAGATTTTGGCATTCCCATGCAATCAGTTTGGAGCACAGGAACCTGGGAGTAATGAAGAGATAGAAAAGTTTGTTTGCACTCGCTTTAAGGCTGAGTATCCCATCTTTGATAAGATTGATGTGAATGGCGATAGTGCTGCTCCACTGTACAAGTTTCTGAAGTCAAGCAAAGGTGGACTCTTTGGTGACAACATCAAATGGAATTTCTCCAAGTTCCTGGTGGACAAAGATGGCAAAGTTGTTGACCGCTATGCACCCACAACTTCTCCCCTTAGCATCGAGAAGGACATAAAGAAACTGCTCGGAATCTCATAA 510 0.4333 MASQSSPQSVHSFTVKDARGNDVDLSIYKGKALLIVNVASQCGLTNSNYTELHQLYEKYKDQGCLEILAFPCNQFGAQEPGSNEEIEKFVCTRFKAEYPIFDKIDVNGDSAAPLYKFLKSSKGGLFGDNIKWNFSKFLVDKDGKVVDRYAPTTSPLSIEKDIKKLLGIS* 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0379 169 ProSiteProfiles Thioredoxin domain profile. 4 167 IPR013766 -
Vvi2g0379 169 ProSitePatterns Glutathione peroxidases signature 2. 68 75 IPR029760 -
Vvi2g0379 169 PRINTS Glutathione peroxidase family signature 28 45 IPR000889 GO:0004602|GO:0006979
Vvi2g0379 169 PRINTS Glutathione peroxidase family signature 130 139 IPR000889 GO:0004602|GO:0006979
Vvi2g0379 169 PRINTS Glutathione peroxidase family signature 65 81 IPR000889 GO:0004602|GO:0006979
Vvi2g0379 169 SUPERFAMILY Thioredoxin-like 8 166 IPR036249 -
Vvi2g0379 169 Gene3D Glutaredoxin 1 167 - -
Vvi2g0379 169 PANTHER GLUTATHIONE PEROXIDASE 4 166 IPR000889 GO:0004602|GO:0006979
Vvi2g0379 169 Pfam Glutathione peroxidase 10 119 IPR000889 GO:0004602|GO:0006979
Vvi2g0379 169 ProSitePatterns Glutathione peroxidases active site. 30 45 IPR029759 -
Vvi2g0379 169 FunFam Glutathione peroxidase 1 168 - -
Vvi2g0379 169 ProSiteProfiles Glutathione peroxidase profile. 1 169 IPR000889 GO:0004602|GO:0006979
Vvi2g0379 169 PIRSF Glutathion_perox 1 168 IPR000889 GO:0004602|GO:0006979
Vvi2g0379 169 CDD GSH_Peroxidase 9 162 IPR000889 GO:0004602|GO:0006979
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0379 Vvi-Chr2 3141389 3143805 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0379 K00432 - vvi:100259774 336.65