Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0378 ATGTCGAAGCAAATACAGCAGGGCCCAGAATCAATCTATGACTTCACCGTTAAGGATGCTGAGGGAAAGAGTGTGAATCTGAGCATTTACAAGGGGAAAGTCCTACTGATTGTCAATGTTGCCTCCAAATGTGGATTAACCAACTCAAATTACACAGAGCTGAATCAGTTATACGAGAAGTACAAAGATCAAGGCCTAGAGATATTGGCATTTCCATGCAATCAATTTGGAGAGGAGGAACCGGGAAGTAATGAACAGATCTTAGAGTTTGTGTGCACTCGCTTCAAATCAGAATTCCCGGTCTTTGACAAGATTGACGTAAATGGCGAAAATGCTGCTCCACTGTACAAGTTCTTAAAGTCAGGAAAATGGGGAATCTTTGGGGATGATATCCAGTGGAACTTTGGCAAATTCCTGGTTGACAAAAATGGGAAAATTGTTGATCGTTATTACCCAACAACTTCCCCTCTCACCGTTGAGAATGATGTAAAGAAGTTGTTGGAGGTGTCTTAA 513 0.4152 MSKQIQQGPESIYDFTVKDAEGKSVNLSIYKGKVLLIVNVASKCGLTNSNYTELNQLYEKYKDQGLEILAFPCNQFGEEEPGSNEQILEFVCTRFKSEFPVFDKIDVNGENAAPLYKFLKSGKWGIFGDDIQWNFGKFLVDKNGKIVDRYYPTTSPLTVENDVKKLLEVS* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0378 170 ProSiteProfiles Glutathione peroxidase profile. 2 170 IPR000889 GO:0004602|GO:0006979
Vvi2g0378 170 Gene3D Glutaredoxin 2 170 - -
Vvi2g0378 170 ProSiteProfiles Thioredoxin domain profile. 6 168 IPR013766 -
Vvi2g0378 170 PIRSF Glutathion_perox 1 170 IPR000889 GO:0004602|GO:0006979
Vvi2g0378 170 PRINTS Glutathione peroxidase family signature 30 47 IPR000889 GO:0004602|GO:0006979
Vvi2g0378 170 PRINTS Glutathione peroxidase family signature 66 82 IPR000889 GO:0004602|GO:0006979
Vvi2g0378 170 PRINTS Glutathione peroxidase family signature 131 140 IPR000889 GO:0004602|GO:0006979
Vvi2g0378 170 CDD GSH_Peroxidase 11 163 IPR000889 GO:0004602|GO:0006979
Vvi2g0378 170 SUPERFAMILY Thioredoxin-like 11 168 IPR036249 -
Vvi2g0378 170 ProSitePatterns Glutathione peroxidases signature 2. 69 76 IPR029760 -
Vvi2g0378 170 FunFam Glutathione peroxidase 3 169 - -
Vvi2g0378 170 ProSitePatterns Glutathione peroxidases active site. 32 47 IPR029759 -
Vvi2g0378 170 PANTHER GLUTATHIONE PEROXIDASE 7 167 IPR000889 GO:0004602|GO:0006979
Vvi2g0378 170 Pfam Glutathione peroxidase 12 120 IPR000889 GO:0004602|GO:0006979
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0378 Vvi-Chr2 3138163 3140590 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0378 K00432 - vvi:100254672 349.747