Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0375 ATGAAGTATGTGAAGCCAGTTAATTTGTTCCATGATTTGCTGAAAATGAAAGCCACTGAACGAGGGCGTTTGCTGGGTTTGGATGTTGGTGATAAGTACGTGGGGTTAGCTGTTTCTGATCTTCATAACAAGATTGCATCGCCCCTAAGTGTTCTGCTTAGGAAGAAATCAAACATTGATTTGATGGCCACTGATTTTCAAAGTTTGATTTCAGACCTTTCTCTGGCAGGCTTCATTGTGGGCTACCCTTTTAATAGACAGCGGAGCTCTCCAACTGCTGTGAACGTGAAAGTTTTCATCGATGATCTCTGTAAAACAGGAAAACTTGAAGGTGTAAGGTATACATATTGGGATGAGTGCTTTACATCAAAGTTTGGAAATTAA 384 0.4036 MKYVKPVNLFHDLLKMKATERGRLLGLDVGDKYVGLAVSDLHNKIASPLSVLLRKKSNIDLMATDFQSLISDLSLAGFIVGYPFNRQRSSPTAVNVKVFIDDLCKTGKLEGVRYTYWDECFTSKFGN* 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0375 127 Gene3D - 21 126 IPR037027 GO:0006139
Vvi2g0375 127 PANTHER POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN 1 124 IPR005227 GO:0006364
Vvi2g0375 127 CDD YqgF 24 124 IPR005227 GO:0006364
Vvi2g0375 127 SUPERFAMILY Ribonuclease H-like 22 124 IPR012337 -
Vvi2g0375 127 SMART rnase_8s 22 126 IPR006641 GO:0006139
Vvi2g0375 127 FunFam Putative pre-16S rRNA nuclease 21 127 - -
Vvi2g0375 127 Pfam Holliday junction resolvase 23 124 IPR005227 GO:0006364
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0375 - - vvi:100266792 250.366