Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0371 ATGGCACTCGTTCCCCAGACGGGTCCATCATACTGCATGAGGTCTGAGGTGGTACACTGTAAAACTGGACAGAGTGCAGTTGTAAACATGACAAACAATATGGAGGCGTCTAAAATAAAGGAAACTCGTACCTGGTTGTCGTCACTATCAAGGAGCCGCACAAAGACAAAGCATATTTTGAGTCCTGATAGTGTAGGTGTTGGATGTAAACAACGACATCAGGTGATTGTTGCTGCGAGCCCTCCTACTGAGGATGCTGTAGTTGCAACCGAGCCACTGACAAGGGAGGATCTTATAGGATACCTTGCCTCTGGATGCAAGCCTAAGGAGAAATGGAGAATAGGTACAGAACATGAGAAGTTTGGTTTCGAGTTTAGAACTCTACGGCCTATGAGATATGAACAAATATCTGAGTTGCTCTATGGTGTTTCTGAAAGATTCGGGTGGGATAAAATAATGGAAGGTGACAACATTATTGGACTCAAACAGGGGAAGCAAAGCATCTCACTGGAACCCGGTGGTCAGTTTGAGCTTAGCGGTGCCCCTCTTGAAACTTTGCATCAAACCTGTGCTGAGGTTAATTCACACCTTTATCAGGTTAAAGCAGTTGCAGAGGAAATGGGGATTGGATTCTTAGGTATTGGTTTCCAGCCCAAATGGGCTATTAAAGATATACCTATAATGCCCAAGGGAAGATACGAGATTATGAGGAATTACATGCCCAAAGTTGGCTCACTTGGACTTGATATGATGTTTAGAACATGTACTGTTCAGGTTAATTTGGACTTCAGTTCTGAAACTGATATGATCAGGAAGTTTCGTGTTGGACTTGCTTTGCAGCCGATAGCAACGGCTCTATTTGCAAATTCTCCTTTTGTTGAGGGAAAGCCAAGTGGTTATCTCAGCATGAGAAGCCAAATTTGGACTGATACCGATAATAACCGTACTGGCATGCTTCCTTTTGTTTTTGATGGCTCCTTTGGATTTGAGCAGTATGTAGATTATGCTCTTGATGTTCCAATGTACTTTGTCTATCGGAAGAAGAAGTATATTGACTGTACTGGAATGTCCTTCCGGGACTTCATAGCAGGAAAACTTCCTTCACTTCCTGGTGAATTGCCAAACTTCAATGATTGGGAGAATCATCTGACAACAATATTCCCTGAGGTCAGGCTGAAGAGATACTTGGAAATGAGGGGTGCTGATGGAGGGCCCTGGAGGAGGTTATGTGCTTTGCCAGCATTTTGGGTAGGCATTTTATATGATGAAGTTTCACTACAAAATGCTCTGGACATTATAGCTGATTGGACACTGGAAGAAAGACAGATGTTGAGGAATAAGGTTCCAAAGACTGGTTTAAAGACACCATTTCGAGATGGATTGCTGAAGCATGTTGCTGAGGATGTTCTAAAGTTAGCGAAGGATGGCTTGGAAAGAAGAGGCTTTAAGGAAACTGGTTTCTTGAATGCAGTGGCTGAGGTGGTTAGAACAGGTGTAACACCAGCTGAGAAGCTTTTGGAGATGTATCACGGGCCGTGGGGACAATGTGTAGATCCTGTTTTTGAGGAGCTACTATATTGA 1581 0.4339 MALVPQTGPSYCMRSEVVHCKTGQSAVVNMTNNMEASKIKETRTWLSSLSRSRTKTKHILSPDSVGVGCKQRHQVIVAASPPTEDAVVATEPLTREDLIGYLASGCKPKEKWRIGTEHEKFGFEFRTLRPMRYEQISELLYGVSERFGWDKIMEGDNIIGLKQGKQSISLEPGGQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFLGIGFQPKWAIKDIPIMPKGRYEIMRNYMPKVGSLGLDMMFRTCTVQVNLDFSSETDMIRKFRVGLALQPIATALFANSPFVEGKPSGYLSMRSQIWTDTDNNRTGMLPFVFDGSFGFEQYVDYALDVPMYFVYRKKKYIDCTGMSFRDFIAGKLPSLPGELPNFNDWENHLTTIFPEVRLKRYLEMRGADGGPWRRLCALPAFWVGILYDEVSLQNALDIIADWTLEERQMLRNKVPKTGLKTPFRDGLLKHVAEDVLKLAKDGLERRGFKETGFLNAVAEVVRTGVTPAEKLLEMYHGPWGQCVDPVFEELLY* 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0371 526 PIRSF GCL 79 526 IPR035434 GO:0004357|GO:0006750
Vvi2g0371 526 FunFam Glutamate--cysteine ligase 78 526 - -
Vvi2g0371 526 SUPERFAMILY Glutamine synthetase/guanido kinase 104 524 IPR014746 GO:0003824
Vvi2g0371 526 Pfam Glutamate-cysteine ligase family 2(GCS2) 146 436 IPR006336 GO:0004357|GO:0042398
Vvi2g0371 526 Gene3D - 78 526 - -
Vvi2g0371 526 PANTHER GLUTAMATE--CYSTEINE LIGASE, CHLOROPLASTIC 57 526 IPR035434 GO:0004357|GO:0006750
Vvi2g0371 526 NCBIfam glutamate--cysteine ligase 92 526 IPR011556 GO:0004357|GO:0006750
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0371 K01919 - vvi:100266723 1072.77