Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0370 ATGGTGGATTCAATTGCTGCAACATCTCTGCTAGGGCATCGACCCCTATGCGGAGGATTGGGATTATCTTGTAAGGACATCTCATACAAACGCAGACTATCTGATGTTTGTCGGTTTCCATTGATGGAATTTCTTGGTAGAAGGATTAGTGCTTCTCCATATTTGCCTAGGAGGAGAGGAGGTGATCGGTTAGGGGCTTTGTCTATTAAGGCTCTTGCAATGGAGTTGACCAAAGAGGCGCATTCCTATAAAGAAGAGAGAATTCCCAGGAATTTGAGATACCGAATTGATACGGGAATTGATAGAAAACCTGGCTTATGGCCACCTGAGAACAAGGCGGATAGCTCTTCCCTACATAATCCCTTGCTTAGGCAAGAAAGAATGGGTTGTGGATGGTTAGGTGCTATATTTGAATGGGAAGGAGTCATAATTGAAGATAATCCTGATCTCGAGAACCAAGCCTGGTTAGCACTTTCTCAAGAAGAGGGAAAATCCCCTCCCCCAGCTTTCATTCTTAGGAGAATAGAAGGGATGAAGAATGAGCAAGCCATTTCTGAAGTTCTTTGCTGGTCCAGAGACCCAGCTCAGTTGAGAAGAATGGCTTCTAGAAAAGAAGATATTTACCAAGCTCTGCAAGGTGGGATGCATAGATTACGCACTGGATCTCAGGAATTTGTGAATGTTCTTATGAATTACAAGATACCAATGGCACTGGTTTCAACTCGACCTAGAAAAACTCTTGAGACTGCAATTGGAACCATTGGAATAGAGAGTTACTTCAGTGTGATCGTAGCAGCAGAGGATGTTTACAGGGGGAAGCCTGATCCTGAGATGTTTGTGTATGCAGCGCAGCTGCTAAACTTTATACCTGAAAGGTGTATTGTGTTTGGGAACTCAAATCTAACTGTGGAGGCTGCTCATGATGCCCGGATGAAGTGTGTGGCTGTTGCCAGCAAGCATCCTGTTTATGAGCTTGGGGCTGCGGACTTGGTCGTGAGGCACCTGGATGAGCTTTCGGTCGTGGACTTAAAGAACCTTGCTGACATTGAATCAACTGAATTTGGGCCTGGAGAGCCAGAAACGGAGATGGAGCGGGAGGAGGATTCATAG 1110 0.4541 MVDSIAATSLLGHRPLCGGLGLSCKDISYKRRLSDVCRFPLMEFLGRRISASPYLPRRRGGDRLGALSIKALAMELTKEAHSYKEERIPRNLRYRIDTGIDRKPGLWPPENKADSSSLHNPLLRQERMGCGWLGAIFEWEGVIIEDNPDLENQAWLALSQEEGKSPPPAFILRRIEGMKNEQAISEVLCWSRDPAQLRRMASRKEDIYQALQGGMHRLRTGSQEFVNVLMNYKIPMALVSTRPRKTLETAIGTIGIESYFSVIVAAEDVYRGKPDPEMFVYAAQLLNFIPERCIVFGNSNLTVEAAHDARMKCVAVASKHPVYELGAADLVVRHLDELSVVDLKNLADIESTEFGPGEPETEMEREEDS* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0370 369 CDD HAD_BPGM-like 195 318 - -
Vvi2g0370 369 Pfam Haloacid dehalogenase-like hydrolase 149 316 IPR041492 -
Vvi2g0370 369 Gene3D Putative phosphatase; domain 2 145 218 IPR023198 -
Vvi2g0370 369 NCBIfam HAD-IA family hydrolase 251 316 IPR006439 -
Vvi2g0370 369 SUPERFAMILY HAD-like 135 338 IPR036412 -
Vvi2g0370 369 Gene3D - 135 333 IPR023214 -
Vvi2g0370 369 PANTHER 5-AMINO-6-(5-PHOSPHO-D-RIBITYLAMINO)URACIL PHOSPHATASE, CHLOROPLASTIC 1 368 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0370 K22912 - vvi:100261521 719.539