Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0369 ATGAGGTTCCAGCAGAATCTGGTATATGACACAGTGGAGCGGAAACTTTGGAGGCTGACTGATAAAGACTATGAAGATAACTTGCAACATGAAGTTGATCTTCTTGTTCAGAAAACACGATCCCGTTTGGGGGAACTTTTTGACATTGAAATTGAAGAAGTTGTAGCTGAGCAGGAAGATCAGACGAAATCCAAAAGGACTCTCAGAAAAAAGAATATGTCACCTCTTGATGTTACAAGGGATGATGAAGCAACAACCAGATTTGACCAACATTTAAAGCCAGAAACACCAGGGAGCTGTACAAGTAACATGTCGGAATACTGCACTATTTTAGTGAACTTTAAGGCATTAACTGGAGAAACTCATCGTGACAAATGGCTGGAGAAGCTTCTTCAAGGAATTCAGTCAGTGTGCTGTTCTGATGATGATGTGCACAGAGATGATAAAGAAAAAGGTGGATCTGGTGACAGTGATCATGCAAGTGATAATAACCGCACAGAAACTGCACATGGATCTGACGCAAAGAGTCTTACTGCTGGCAGATCTTTTATCTGGCCAGATGCTGCTGTTCCAGCAGTGACTGCTCTTGAGCAAGCATCACAAGATGCTTTTTCTTCAGATTTCCAGAAGTACAACCAAAAAATGCGACAGTTGGTGTTCAATCTCAAGAACAATCCACTATTAGCCAGGCGTCTACTAAATGGAGAATTGGAACCTTCAAAAATACTAAACATGTCACCTAATGAGTTAAAGGAGGGTTTAACGGCAGAAGAAACAGCAAAGAAGGAGCCTGAGGAGTTGAAGCGAATGCAGATGACCGATGCTCGCTGCAAAAGATGCCAGGAAAAAAAAGTGGGTGTAACAGACATCATCCATGCAGGAAATGCAGACCGCTACCAGTTGGAGTGCATTGCCTGTGGTAACAACTGGTATGCTCCCAGAGATGAGATTTCCACATTAAATGATGGTCCAAGTTCTGCCAGGAGTGTAGGTACAGCACCATGGGCCACTGCCAAGTTTGAAGATGTTGAGAAGAAGCTAGTGAGTCCCCGTGAATCTGAGAAGCTGGAAGCCTTGAAGAAAACAACTGAACCATACATGCCAGTCTTGGACTCTCAGAAATCATTCAGCAAGCCTAAAAACGAAGACAACCCTGCATCTGCTAAAACTGGTGACAATTCTGGATCTACTAAGGTTACGGAGTAG 1206 0.432 MRFQQNLVYDTVERKLWRLTDKDYEDNLQHEVDLLVQKTRSRLGELFDIEIEEVVAEQEDQTKSKRTLRKKNMSPLDVTRDDEATTRFDQHLKPETPGSCTSNMSEYCTILVNFKALTGETHRDKWLEKLLQGIQSVCCSDDDVHRDDKEKGGSGDSDHASDNNRTETAHGSDAKSLTAGRSFIWPDAAVPAVTALEQASQDAFSSDFQKYNQKMRQLVFNLKNNPLLARRLLNGELEPSKILNMSPNELKEGLTAEETAKKEPEELKRMQMTDARCKRCQEKKVGVTDIIHAGNADRYQLECIACGNNWYAPRDEISTLNDGPSSARSVGTAPWATAKFEDVEKKLVSPRESEKLEALKKTTEPYMPVLDSQKSFSKPKNEDNPASAKTGDNSGSTKVTE* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0369 401 MobiDBLite consensus disorder prediction 344 361 - -
Vvi2g0369 401 ProSiteProfiles TFIIS central domain profile. 122 278 IPR003618 GO:0006351
Vvi2g0369 401 SMART mid_6 162 260 IPR003618 GO:0006351
Vvi2g0369 401 PANTHER BROMO-ADJACENT HOMOLOGY (BAH) DOMAIN-CONTAINING PROTEIN 8 387 - -
Vvi2g0369 401 Gene3D - 109 252 IPR036575 GO:0006351
Vvi2g0369 401 MobiDBLite consensus disorder prediction 344 401 - -
Vvi2g0369 401 MobiDBLite consensus disorder prediction 142 169 - -
Vvi2g0369 401 MobiDBLite consensus disorder prediction 379 401 - -
Vvi2g0369 401 MobiDBLite consensus disorder prediction 142 175 - -
Vvi2g0369 401 Pfam Transcription factor S-II (TFIIS), central domain 118 270 IPR003618 GO:0006351
Vvi2g0369 401 SUPERFAMILY Elongation factor TFIIS domain 2 118 251 IPR036575 GO:0006351
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0369 - - vvi:100251356 784.252