Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0365 ATGGAGAGCGAAGCTTCAGACCCTACTCCGAACATGCAATCTCTATCTGTCAACGATTCTCAGAATCACGACTCCGCCAGTTCTTCCAATCCAGCGCCCGCGATGACGTTGGAGGAGAAGTTCAGGATCGTGAGGAGTGTGGGAGAGGAGTGTATACAAGAGGATGAGCTGATGAATCTGCTGAGGAATAAACCTGAACCCATATGCTATGATGGCTTTGAACCCTCTGGCAGAATGCATATTGCTCAGGGAGTTATGAAGACAATAAGTGTGAACAAACTCACATCTGCCGGGTGCAGAGTGAAGATATGGATTGCAGATTGGTTTGCACAGCTAAACAATAAAATGGGGGGTGATCTGAAGAAAATTGAAACAGTTGGACGATATCTGATTGAGATATGGAAAGCTGTTGGGATGGATCTTGACGGAGGCAAAGTTGAGTTTTTGTGGTCTTCAAAAGAAATTAATGCCAGAGCACATGAGTACTGGCCTCGTGTAATGGATATAGCTAGAAGGAACAAGCTCCCTAGGATAATGAGGTGTGTTCAAATTATGGGTCGATCCGAGCAGGAGGAATTGAGTGCAGCTCAGATTCTATACCCATGCATGCAATGTGCTGACATATTTTTCCTTAAGGCTGACATCTGCCAGTTGGGAATGGATCAGAGGAAAGTGAATGTACTTGCCAGAGAGTATTGTGATGATATCAAAATGAAGAACAAGCCTATCATCTTGTCACACCATATGCTACCTGGTCTACAGCAAGGGCAGGAGAAGATGTCAAAAAGTGACCCCTCATCCTCCATTTTCATGGAGGATGAAGAGGCCGAGGTGAATGTGAAGATAAAGAAGGCTTACTGCCCTCCAAAAGTTGTTGAAGGAAATCCATGCTTGGAGTATGTGAATTACATCATTTTCCCATGGTTTAATGAGTTCAAAGTAGAGCGCAAAGCTGAAAATGGTGGAGATAAGATCTTCAAAAGTTACGAAGAATTGATTGCTGACTATGAAAATGGGGAGCTACATCCAGGCGATCTCAAACCTTCTTTGTCTAAGGCTTTAAATAAGATACTACAGCCTGTGCGAGATCACTTTGCTAATGACAGCAATGCCAAAGATCTGTTGAAGCGGGTCAAGGCCTACAGAGTCACCCGGTGA 1158 0.4413 MESEASDPTPNMQSLSVNDSQNHDSASSSNPAPAMTLEEKFRIVRSVGEECIQEDELMNLLRNKPEPICYDGFEPSGRMHIAQGVMKTISVNKLTSAGCRVKIWIADWFAQLNNKMGGDLKKIETVGRYLIEIWKAVGMDLDGGKVEFLWSSKEINARAHEYWPRVMDIARRNKLPRIMRCVQIMGRSEQEELSAAQILYPCMQCADIFFLKADICQLGMDQRKVNVLAREYCDDIKMKNKPIILSHHMLPGLQQGQEKMSKSDPSSSIFMEDEEAEVNVKIKKAYCPPKVVEGNPCLEYVNYIIFPWFNEFKVERKAENGGDKIFKSYEELIADYENGELHPGDLKPSLSKALNKILQPVRDHFANDSNAKDLLKRVKAYRVTR* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0365 385 SUPERFAMILY Nucleotidylyl transferase 41 370 - -
Vvi2g0365 385 FunFam tyrosine--tRNA ligase 1, cytoplasmic 194 385 - -
Vvi2g0365 385 Pfam tRNA synthetases class I (W and Y) 65 359 IPR002305 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Vvi2g0365 385 Gene3D HUPs 32 195 IPR014729 -
Vvi2g0365 385 Gene3D HUPs 196 383 IPR014729 -
Vvi2g0365 385 MobiDBLite consensus disorder prediction 1 34 - -
Vvi2g0365 385 PIRSF TyrRS_arch_euk 34 384 IPR023617 GO:0004831
Vvi2g0365 385 FunFam Tyrosine--tRNA ligase 1 cytoplasmic 31 193 - -
Vvi2g0365 385 PANTHER TYROSINE-TRNA LIGASE 9 384 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0365 K01866 - vvi:100251282 786.949