Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0357 ATGGATTTGCAGAGGCTTTGTTGCGTTATTCTTGCATTTGCTGTGGTTCTGTTCGTCTGTTTCTCTTCTTCCGTGACAGCTGGGGACATCGTGCACGATGACGACGACGCCCCCAAGAAGCCTGGGTGTGAGAACGATTTTGTTTTGGTAAAAGTTCAAACTTGGGTTGATGGTGTAGAAGATGCTGAATTTGTTGGTGTTGGGGCTAGATTTGGTCCTAAAATTGTGTCAAAGGAGAAAAATGCACATCAATCTCACCTTACTCTTTCAGATCCCCCTGATTGTTGCACTGCACCGAGGAAACAGCTTGCTAGAGATGTCATTATGGTGCACCGAGGCAACTGTAGATTCACAACTAAGGCAAATGTTGCAGAAGCTGCTGGTGCTTCAGCTGTTCTCATTATAAACAACCAGAAAGAACTTTACAAGATGGTTTGTGAGCCTGATGAAACTGATCTTGATATAAAAATACCTGCTGTCATGCTTCCACAAGAAGCTGGTGCAAGCTTGGAAAAAATGTTGAGGAATAGCTCATCAGTGTCTGTGCAGCTATACTCTCCACGAAGACCATTAGTTGACATAGCCGAAGTTTTCCTATGGCTGATGGCAGTTGGTACTATCTTGTGTGCATCTTATTGGTCTGCATGGAGTGCCAGAGAGGCAGCTATTGAACAGGACAAGCTACTAAAGGATGCTTCAGATGAGCTTACAAATGCCAAAGATGGTGGTGCTAGTGGTGTGGTAGACATCAACACAACATCAGCTGTCTTGTTTGTTGTTATTGCTTCATGCTTTTTGGTTATGCTTTACAAACTTATGTCCTACTGGTTCGTTGAGCTTTTGGTGGTTCTATTTTGCATAGGTGGTGTCGAGGGCTTGCAAACTTGTCTGGTTGCTTTGTTGTCGAGGTGGTTCAAACGTGCTGGAGAAGCATTCATTAAAGTACCTTTCTTTGGAGCTGTCTCATACCTTACTTTGGCTGTTTCTCCATTCTGCATAACATTTGCTGTTGTTTGGGCAGTCTATCGTGATGTCTCCTTTGCCTGGATAGGTCAAGACATACTTGGAATTGCACTAATTATCACAGTTCTTCAGATCGTACATATACCTAATCTCAAGGTGGGTACAGTTCTTCTTAGTTGTGCCTTTTTGTACGACATCTTTTGGGTGTTCGTTTCTAAAAAGCTGTTCCATGAAAGTGTGATGATTGTGGTAGCTCGTGGTGATAGAAGTGGACAGGATGGTATTCCTATGCTACTGAAGATCCCCCGCATGTTTGATCCATGGGGTGGTTACAGTATCATTGGCTTTGGTGACATCCTATTACCAGGACTGCTAATAGCATTTTCACTTAGGTATGATTGGCTGGCAAAGAAGAATATCCAAACTGGATACTTTTTGTGGGCAATGTTTGCTTATGGATTAGGTCTTCTCATCACATATGTGGCACTGAACTTGATGGATGGGCATGGCCAACCGGCACTCCTATACATCGTGCCATTCACACTGGGAACCTTTTTGACACTGGGGAGGAAGAGAGGCGATCTCAAGAACCTATGGACAAGAGGAGTTCCAGAAAGACCCTGCCCCCATGTCCAACACGAACACAGTCAAGAATTCGCTCAAGAATTTAATGAGGAGAAGTAA 1647 0.4378 MDLQRLCCVILAFAVVLFVCFSSSVTAGDIVHDDDDAPKKPGCENDFVLVKVQTWVDGVEDAEFVGVGARFGPKIVSKEKNAHQSHLTLSDPPDCCTAPRKQLARDVIMVHRGNCRFTTKANVAEAAGASAVLIINNQKELYKMVCEPDETDLDIKIPAVMLPQEAGASLEKMLRNSSSVSVQLYSPRRPLVDIAEVFLWLMAVGTILCASYWSAWSAREAAIEQDKLLKDASDELTNAKDGGASGVVDINTTSAVLFVVIASCFLVMLYKLMSYWFVELLVVLFCIGGVEGLQTCLVALLSRWFKRAGEAFIKVPFFGAVSYLTLAVSPFCITFAVVWAVYRDVSFAWIGQDILGIALIITVLQIVHIPNLKVGTVLLSCAFLYDIFWVFVSKKLFHESVMIVVARGDRSGQDGIPMLLKIPRMFDPWGGYSIIGFGDILLPGLLIAFSLRYDWLAKKNIQTGYFLWAMFAYGLGLLITYVALNLMDGHGQPALLYIVPFTLGTFLTLGRKRGDLKNLWTRGVPERPCPHVQHEHSQEFAQEFNEEK* 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0357 548 SMART psh_8 246 513 IPR006639 GO:0004190|GO:0016020
Vvi2g0357 548 Pfam Signal peptide peptidase 247 522 IPR007369 GO:0004190|GO:0016020
Vvi2g0357 548 SUPERFAMILY PA domain 106 178 IPR046450 -
Vvi2g0357 548 FunFam Signal peptide peptidase-like 3 49 188 - -
Vvi2g0357 548 PANTHER SIGNAL PEPTIDE PEPTIDASE 77 540 IPR007369 GO:0004190|GO:0016020
Vvi2g0357 548 Pfam PA domain 96 170 IPR003137 -
Vvi2g0357 548 Gene3D - 57 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0357 Vvi-Chr2 2898362 2907921 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0357 K09597 - vvi:100241031 1099.73