Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0348 ATGGTCTTGGCCCCTACTGAAAAGGTGGTTTTAGGCTCAATAGCCTTTGCAATCTTCTGGGTTTTGGCAGTGTTCCCAGCAGTTCCTTTTCTACCCATTGGTAGGACTGCAGGGTCTCTCCTAGGAGCCATACTCATGGTCATCTTCAGGGTCATAACCCCAGATCAAGCATATGCTGCCATTGACCTCTCAATCCTTGGCCTTCTTTTTGGAACTATGGTCGTGAGCGTCTATCTTGAACAAGCTGATATGTTCAAATACTTGGGTGTACTGCTTTTATGGAAGAGTAAGGGTGCAAAGGATTTGCTTTGCCGGATATGTGTAGTTTCTGCCATTTCAAGTGCATTCTTCACCAATGACACCAGTTGTGTTGTGCTGACAGAGTTTGTTCTGAAAATAGCTGAGCAGAATAATGTCCCTCCCCATCCCTTCTTACTGGCCTTGGCCTCGAACGCAAATATTGGATCTTCTGCAACTCCAATTGGTAATCCCCAAAACTTGGTCATTGCCATCCAGAGTAGCCTCTCTTTTGGGGAATTCTTGTTGGGACTCCTCCCTGCAATGCTGGTGGGTGTTTTCGTCAATGCTTTGATCCTTCTATGCATGTATTGGAGACTGCTGTCTGTTGAAAAGGATGAAGAACATGCTTTGGATGAAGTGATTTCCGAGGAAGATGCGGCTTCCCACCGCTTCTCACCTGCAGCCATGTCACATCCCACAGCTTCAAATTCTCAAGAATTGAATCCTGTGTTGGAACCAATGAATACCTGGGGCTCCCCAAGTTCAAATGGGAGCACAATCCATACCGAGACTCTCAGAAACAGAGCAGGTTCAAAACAGAGCAATTTGCAGGGGACTTTGAATGGTGGCGTTGAGTTAACAAGGAATTCAAGTGCTTCCAAAGAGGGGGTGGTTGGTGATGATTTCCCTCAACCGAGGGAGCAAGATTTTCATTCGAGGAGAGTTGAAAAAAGTGCGCTAAATGGCAGTGATGAAATGGTGAATGTCGACGAGGAAGACACTGTCCCAGTGCAGCCTCTGGAAGAAAATGAAAGCTCGGCCAAGCCATGGAAAAGACTGCTTTGGAAGACATGTGTTTACCTTGTTACTATTGGCATGCTGATAGCATTGCTTGTTGGTCTAAACATGTCATGGACAGCCCTTACTGCAGCACTTGCTCTTGTGGTTCTCGACTTCAAGGATGCTCAGCCATGCCTACAAAAGGTTTCATATTCTATCTTAATCTTCTTTTGTGGCATGTTCATCACAGTGGATGGCTTTAACAGAACAGGGATACCTAGCACTCTCTGGAACCTAACCGAGCCTTATGCACGAATCAATCATGTTGGAGGGATCGTAGTTCTTACCCTAGTCATTCTTGTCCTCTCAAATGTTGCTTCAAATGTGCCTACTGTTCTTTTGCTTGGAGCAAGAGTGGCAGCATCAGCAACAATGACATCTCAGGGCCAAGAGAAAAGGGCATGGTTGATCTTAGCATGGGTGAGCACGGTTGCTGGAAACCTTTCGCTGTTGGGGTCAGCTGCAAACCTGATAGTGTGCGAGCAGGCTCGTCGTGCTCGGTTCTTTGGCTACACTCTCTCCTTCTGGAGCCACCTCAAGTTTGGTGTTCCTTCAACTCTCATAGTCACAGCCATTGGCTTACTCCTCATAAGGGGTTGA 1680 0.4667 MVLAPTEKVVLGSIAFAIFWVLAVFPAVPFLPIGRTAGSLLGAILMVIFRVITPDQAYAAIDLSILGLLFGTMVVSVYLEQADMFKYLGVLLLWKSKGAKDLLCRICVVSAISSAFFTNDTSCVVLTEFVLKIAEQNNVPPHPFLLALASNANIGSSATPIGNPQNLVIAIQSSLSFGEFLLGLLPAMLVGVFVNALILLCMYWRLLSVEKDEEHALDEVISEEDAASHRFSPAAMSHPTASNSQELNPVLEPMNTWGSPSSNGSTIHTETLRNRAGSKQSNLQGTLNGGVELTRNSSASKEGVVGDDFPQPREQDFHSRRVEKSALNGSDEMVNVDEEDTVPVQPLEENESSAKPWKRLLWKTCVYLVTIGMLIALLVGLNMSWTALTAALALVVLDFKDAQPCLQKVSYSILIFFCGMFITVDGFNRTGIPSTLWNLTEPYARINHVGGIVVLTLVILVLSNVASNVPTVLLLGARVAASATMTSQGQEKRAWLILAWVSTVAGNLSLLGSAANLIVCEQARRARFFGYTLSFWSHLKFGVPSTLIVTAIGLLLIRG* 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0348 559 MobiDBLite consensus disorder prediction 235 301 - -
Vvi2g0348 559 MobiDBLite consensus disorder prediction 307 321 - -
Vvi2g0348 559 PANTHER TRANSPORTER ARSB-RELATED 1 557 - -
Vvi2g0348 559 CDD YbiR_permease 28 557 - -
Vvi2g0348 559 MobiDBLite consensus disorder prediction 230 321 - -
Vvi2g0348 559 Pfam Citrate transporter 27 505 IPR004680 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0348 Vvi-Chr2 2821736 2823814 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0348 - - vvi:100242765 1062.75