Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0346 ATGAGAAGCGTGAATGGAGATACGAGAAGTATGAACAGCGCTTTGGAGACTATAAACGCTGCTGCAACTGCGATCGCCTCAGCTGAGAATCGTGTGCCTCAACCTACCGTTCAGAAAAGAAGATGGGGGAGCTGCTGGGGTGAATATTGGTGTTTTAGATCTCCTAAAGACAAACGTATTGGGCATGCAGTCCTTGCTCCTGAATCGAGAGCTCCTGGAAGTGGTGTCCCTGCAGCTGAAAATCTGACACAGGCACCCACCATAGTGCTACCCTTTGTTGCTCCTCCCTCATCTCCGGCATCTTTCCTTCAATCGGAACCTCCTTCTGCAACTCAATCACCATCTGGGTTATTGTCCCTCACCTCCATTAATGCCAATATATATTCTCCAGGCGGGCCTGCCTCCATTTTTGCCATTGGACCTTATGCCCACGAGACCCAGCTAGTCTCACCCCCTGTGTTCTCAACCTTCACCACTGAACCATCAACTGCTCCCTTCACTCCTCCCCCTGAGTCAGTCCACTTGACCACACCCTCTTCCCCTGAAGTGCCATTTGCTCAACTCTTTGATCCAAACAACCGCAATGGTGAGGCTGGCCATAGATTTCTATTATCTCAATATGAATTTCAGTCCTATCAACTTTACCCTGGAAGCCCAGTTGGCCACCTTATCTCACCGAGCTCAGGGATCTCAGGTTCTGGCACCTCCTCTCCCTTTCCTGACCGTGACTTTGTTTGTAGTGGTAGTTCCCAATTCCTTGAATTCCGAGCAGGTGGACCTCCCAAGCTCCTGACCCTTGATAAACTGTCCAACCATGAGTGGGGATCACGGATAGGTTCTGGTTCAATCACCCCGGATGCTCTGGGTCCACCATCTCGTGATGGTTCTGTTCTGGATCGTCAGGTTTCTGATGTGATACATCCACCATCTGGTGATGATTCTGTTCTGGATCGCCAGATTTCTGATGTTGCTTCACATTCACTTTCAGACAGTGGATGCCCCAACAATGAAATTATGGTTGATCATAGAGTCTCATTTGAGTTGACTGCAGAAGACGTCGTCAGATGTGTTGAAAAGGACTCAGCAGCTCTAGTTAAAGCTGTATCGGCTTCTCTGCAAAATCCAGCAACAGTTGAAATAGATGAAAATTCAAGGGAAGTGGTTGTTGATTCTGAAGGTCGTGTTGGGGAAACAGCCAATAACCCACCAGAGAAAGCTCCAGAAGATGCAAATGGGGAGGAGGGACAACCTCATCATAAGCAACGCTCCATCACTCTTGGGTCTGCTAAAGAATTCAATTTTGACAATGCTGATGGAGGACATTCAGATAAGCCCAATATTAGCTCCGACTGGTGGGCCAATGAGAAGGTTGTAGGGAAGGAGGTTGGCGCCAGTAAGAATTGGTCCATCTTCCATATGATGCAGCCAAGTGTGAGCTAA 1440 0.484 MRSVNGDTRSMNSALETINAAATAIASAENRVPQPTVQKRRWGSCWGEYWCFRSPKDKRIGHAVLAPESRAPGSGVPAAENLTQAPTIVLPFVAPPSSPASFLQSEPPSATQSPSGLLSLTSINANIYSPGGPASIFAIGPYAHETQLVSPPVFSTFTTEPSTAPFTPPPESVHLTTPSSPEVPFAQLFDPNNRNGEAGHRFLLSQYEFQSYQLYPGSPVGHLISPSSGISGSGTSSPFPDRDFVCSGSSQFLEFRAGGPPKLLTLDKLSNHEWGSRIGSGSITPDALGPPSRDGSVLDRQVSDVIHPPSGDDSVLDRQISDVASHSLSDSGCPNNEIMVDHRVSFELTAEDVVRCVEKDSAALVKAVSASLQNPATVEIDENSREVVVDSEGRVGETANNPPEKAPEDANGEEGQPHHKQRSITLGSAKEFNFDNADGGHSDKPNISSDWWANEKVVGKEVGASKNWSIFHMMQPSVS* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0346 479 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE 9 479 IPR040420 -
Vvi2g0346 479 MobiDBLite consensus disorder prediction 388 425 - -
Vvi2g0346 479 MobiDBLite consensus disorder prediction 277 297 - -
Vvi2g0346 479 Coils Coil 11 31 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0346 Vvi-Chr2 2810176 2813119 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0346 - - vvi:100241023 935.25