Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0345 ATGTACAAAACCTTGCTAGGAAGTCAAGGATTCCGAAAAGGCATGGATCTTTATTTTAAGAGGCATGATGGGCAAGCTGTAACCTGTGAAGATTTCTTTGCTGCCATGAGAGATGCAAATGATGCAGATTTTGCTAATTTCTTGTTGTGGTACTCCCAAGCTGGTACGCCTCTCGTGAAGGTTACTTCTTCCTACAATGCTGAAGCCCATACTTACTCTTTGAAGTTTAGTCAAGAGGTTCCACCAACTCCAGGACAGCCAGTGAAAGAACCAATGTTCATTCCTGTTGCAGTAGGTTTCCTGGACTCAACTGGCAAGGAGATGCCCCTCTCATCTGTGTATCATGATGGGACTTTGCAGTCTGTTGTGAGCAATGATCAGCCAACTTACACTACAGTTCTTCGAGTAACAAAGAAAGAAGAAGAATTTTTGTTCTCTGATATATCTGAGAAGCCAATTGCATCTCTTTTGCGGGGCTACAGTGCTCCTATTCGTCTGGACACTGATCTCACGGACAGCGATTTGTTTTTCCTTCTTGCTCATGATTCAGATGAGTTCAACCGTTGGGAGGCTGGGCAGGTGTTGGCAAGGAAGCTGATGCTTGGTTTAGTGGCTGATTTCCAACAAAATAGACCATTGGTTCTGAATCCAAAGTTTGTGCATGGGCTCAAAAGCATACTTCTTGACTCAAGCTTGGATAAAGAATTCATTGCAAAGGCAATAACACTGCCGGGTGAAGGGGAGATCATGGACATTATGGAAGTTGCCGATCCTGATGCAGTGCATGCTGTTCGATCTTTCATCAGGAAGCAGCTGGCGTCTGAACTGAGAGCAGAGCTCCTTAGCACAGTTGAAAAGAATAGGAGCTCGGAGGATTATGTGTTTAACCATCCTAATATGGCTAGACGTGCACTGAAGAATGTTGCCCTTGGATATCTTGCATTATTGGATGATCCAGAACTCACCGAGCTTGCATTGCACGAATATAGAACTGCTGCAAATATGACTGAACAGTTTGCAGCTCTGGCTGCCATAGCCCAGATCCCTGGTAAGACCCGTGATGATGTATTGGCTGACTTCTACAGCAAGTGGCAGCAAGACTTTTTGGTTGTCAATAAATGGTTTGCCCTTCAAGCCATGGCAGACATTCCTCAGAATGTTGAGAATGTTCGTAACCTCTTAAACCATCCAGCTTTTGACTTACGTAATCCAAACAAGGTATACTCGCTGATTGGAGGATTCTGTGGATCTCCTGTGAATTTCCACGCAAAGGACGGGTCAGGCTATAAGTTCTTGGGAGAAATGGTGGTGCAACTGGATAAGATCAACCCTCAGGTGGCCTCTCGCATGGTGTCTGCCTTCTCAAGATGGAAGCGTTATGATGATACTCGGAAAAGCCTTGCGAAGGCACAGTTGGAGATGATAGTAGCCTGCAATGGACTGTCTGAGAATGTGTATGAAATTGCCTCCAAAAGCTTAGCTGCTTAA 1488 0.4496 MYKTLLGSQGFRKGMDLYFKRHDGQAVTCEDFFAAMRDANDADFANFLLWYSQAGTPLVKVTSSYNAEAHTYSLKFSQEVPPTPGQPVKEPMFIPVAVGFLDSTGKEMPLSSVYHDGTLQSVVSNDQPTYTTVLRVTKKEEEFLFSDISEKPIASLLRGYSAPIRLDTDLTDSDLFFLLAHDSDEFNRWEAGQVLARKLMLGLVADFQQNRPLVLNPKFVHGLKSILLDSSLDKEFIAKAITLPGEGEIMDIMEVADPDAVHAVRSFIRKQLASELRAELLSTVEKNRSSEDYVFNHPNMARRALKNVALGYLALLDDPELTELALHEYRTAANMTEQFAALAAIAQIPGKTRDDVLADFYSKWQQDFLVVNKWFALQAMADIPQNVENVRNLLNHPAFDLRNPNKVYSLIGGFCGSPVNFHAKDGSGYKFLGEMVVQLDKINPQVASRMVSAFSRWKRYDDTRKSLAKAQLEMIVACNGLSENVYEIASKSLAA* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0345 495 Gene3D - 170 494 IPR037144 -
Vvi2g0345 495 FunFam Aminopeptidase N 55 169 - -
Vvi2g0345 495 Gene3D Neutral Protease Domain 2 1 54 IPR027268 -
Vvi2g0345 495 Pfam Domain of unknown function (DUF3458) Ig-like fold 55 169 IPR035414 -
Vvi2g0345 495 Pfam Domain of unknown function (DUF3458_C) ARM repeats 172 494 IPR024601 -
Vvi2g0345 495 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 1 61 - -
Vvi2g0345 495 Gene3D - 55 168 IPR038438 -
Vvi2g0345 495 PANTHER PUROMYCIN-SENSITIVE AMINOPEPTIDASE 1 495 IPR012779 GO:0008270
Vvi2g0345 495 FunFam Puromycin-sensitive aminopeptidase 170 494 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0345 K01256 - vvi:100263283 969.533