Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0344 ATGGCTCGGTTGATTCTTCCGTGTAAAGGTTCGGGTTTGGCAAGGACGGGTCTTTTGGGTTTGATCTCCTCTGCTCCTCTCCAAGCCCCGTGTTGTGTTAGTTCCCTTAAACATTCAGCAAAGAATATCTCTAGATATAGGCAATCTCTTAACTTAGAGGTTTCACATCGGAGAAATTACCGGTTTCCTCATCCATCATTATATAGGGCTAAGCAAGTCAGCAGGAGGTTTGTCTGCTCAGTTGCAACAGAAAGCTCACCAAAGCAAGTTGAAGAATCCAAAATGGATATGCCAAAAGAAATCTTCCTGAAGGATTACAAGCTTCCTGATTACTACTTTGATACGATGGATTTGAATTTTTTGTTGGGTGAGGAGAAAACAACTGTCTATTCAAAAATAACTGTCTTACCCAGAGTTGAAGGTTCTCCTTTCCCACTGGTATTGGATGGGGTAGATCTGAAGCTTGTTTCAGTAAAGGTCAACAGCAAGGAACTTAAGGAAGAAGATTACGTCCTGAGCCCCCGCCATCTGACACTTCCATCACTTCCAAGTGGTGAATTTACTCTGGAAATTGTTACTGAGATATGTCCACAAAAGAACACATCATTAGAGGGCCTTTACAAGTCATCTGGGAATTTCTGTACACAATGTGAAGCAGAGGGTTTCCGAAAAATTACATTCTATCAGGATCGCCCTGATATTATGGCAAAATACACATGCCGCATTGAAGGTGATAAGTCATTATACCCGGTATTGTTGTCTAATGGAAATCTCATAGAGCATGGAGACCTTGAGGGTGGCAAACACTATGCCATTTGGGAGGACCCCTTCAAGAAACCTTGTTACTTATTTGCTTTAGTTGCTGGACAGTTGGAAAGCAGAGATGACACTTTTGTTACCCGTTCAGGCCGAACTGTATCCTTGAGGATCTGGACCCCAGCACAAGATGTACCCAGGACTGTCCATGCCATGTATTCCCTTAAAGCAGCCATGAAATGGGATGAGGATGTTTTTGGTCTTGAGTATGACCTGGATCTGTTCAATATTGTGGCAGTTCCAGATTTTAACATGGGAGCCATGGAAAACAAAAGTTTGAATATTTTCAATTCCAAGCTTGTCTTGGCATCTCCAGAAACTGCTACGGATGCAGATTATGCAGCAATTTTGGGAGTTATTGGTCATGAGTATTTCCACAACTGGACTGGTAACAGAGTGACATGTCGTGACTGGTTCCAGCTCAGCTTAAAGGAAGGTCTTACAGTTTTCCGTGATCAGGAATTTTCATCTGACATGGGAAGCCGCACAGTAAAGCGAATTGCTGATGTTTCAAGGCTTCGAAATTATCAATTTCCACAGGATGCTGGTCCGATGGCACATCCTGTACGGCCACATTCTTACATCAAGATGGACAACTTCTACACAGGTAAGTTTGTGTTTTCTGTGATTTGA 1449 0.4265 MARLILPCKGSGLARTGLLGLISSAPLQAPCCVSSLKHSAKNISRYRQSLNLEVSHRRNYRFPHPSLYRAKQVSRRFVCSVATESSPKQVEESKMDMPKEIFLKDYKLPDYYFDTMDLNFLLGEEKTTVYSKITVLPRVEGSPFPLVLDGVDLKLVSVKVNSKELKEEDYVLSPRHLTLPSLPSGEFTLEIVTEICPQKNTSLEGLYKSSGNFCTQCEAEGFRKITFYQDRPDIMAKYTCRIEGDKSLYPVLLSNGNLIEHGDLEGGKHYAIWEDPFKKPCYLFALVAGQLESRDDTFVTRSGRTVSLRIWTPAQDVPRTVHAMYSLKAAMKWDEDVFGLEYDLDLFNIVAVPDFNMGAMENKSLNIFNSKLVLASPETATDADYAAILGVIGHEYFHNWTGNRVTCRDWFQLSLKEGLTVFRDQEFSSDMGSRTVKRIADVSRLRNYQFPQDAGPMAHPVRPHSYIKMDNFYTGKFVFSVI* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0344 482 Gene3D tricorn interacting facor f3 domain 108 291 IPR042097 -
Vvi2g0344 482 Gene3D Neutral Protease Domain 2 377 479 IPR027268 -
Vvi2g0344 482 FunFam Aminopeptidase N 108 291 - -
Vvi2g0344 482 CDD M1_APN 105 474 - -
Vvi2g0344 482 FunFam Putative aminopeptidase N 293 376 - -
Vvi2g0344 482 Pfam Peptidase M1 N-terminal domain 181 283 IPR045357 -
Vvi2g0344 482 PANTHER PUROMYCIN-SENSITIVE AMINOPEPTIDASE 93 474 IPR012779 GO:0008270
Vvi2g0344 482 PRINTS Membrane alanyl dipeptidase (M1) family signature 355 365 IPR001930 GO:0006508
Vvi2g0344 482 PRINTS Membrane alanyl dipeptidase (M1) family signature 410 422 IPR001930 GO:0006508
Vvi2g0344 482 PRINTS Membrane alanyl dipeptidase (M1) family signature 223 238 IPR001930 GO:0006508
Vvi2g0344 482 PRINTS Membrane alanyl dipeptidase (M1) family signature 273 288 IPR001930 GO:0006508
Vvi2g0344 482 PRINTS Membrane alanyl dipeptidase (M1) family signature 391 406 IPR001930 GO:0006508
Vvi2g0344 482 FunFam Aminopeptidase N 377 479 - -
Vvi2g0344 482 Pfam Peptidase family M1 domain 325 473 IPR014782 GO:0008237|GO:0008270
Vvi2g0344 482 SUPERFAMILY Leukotriene A4 hydrolase N-terminal domain 99 289 IPR042097 -
Vvi2g0344 482 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 301 474 - -
Vvi2g0344 482 Gene3D - 293 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0344 Vvi-Chr2 2794278 2803836 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0344 K01256 - vvi:100263283 966.837