Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0342 ATGACGGCGGCTTCCGGTTTATTTCTGATTCCGACAGCAGCCAGAGCCAGTTTGATTCAGCATCCAAAATTCTATCTTGAATGGAAAGATAAAACCTTCAGTAGCATTTCTTCTACGTTTGCTGCGAGTTCAAGGACGAGAAACCGCCGACGGGTGTCTGTTTCCACCCATTTTTGCTGCAACTCTCTACTTTCCGATCTTGCCCCTGCCACCTCTGCAGCCTACGGTGCTATGCTCCTCGGCGGCGGCGTCTTTGCCTATACAAGATCTGGGAGCAAGGGCTCACTTTTTGGAGGATTTACAGGAGCAGCACTAATGGCAACGGCTTACCTTCTTATGCAAGTCCCCAAGACAAAAGACATAGGTGACGCCCTCGGGTTTGGATCAGCTTTCCTTTTCTCTTCTGTATTTGGTATACGATTAGCGGCCACTCGTAAACTAGTCCCTTCAGGCCTGTTGTTAGGACTTTCCATCTTTGCATTGACTGTGTTTATCTCTGCCTATCTACAAGATATCTCTGATCCACTACATGTCTCCTAA 540 0.4778 MTAASGLFLIPTAARASLIQHPKFYLEWKDKTFSSISSTFAASSRTRNRRRVSVSTHFCCNSLLSDLAPATSAAYGAMLLGGGVFAYTRSGSKGSLFGGFTGAALMATAYLLMQVPKTKDIGDALGFGSAFLFSSVFGIRLAATRKLVPSGLLLGLSIFALTVFISAYLQDISDPLHVS* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0342 179 Gene3D - 68 171 IPR044890 -
Vvi2g0342 179 Pfam Transmembrane proteins 14C 72 163 IPR005349 GO:0016020
Vvi2g0342 179 PANTHER TRANSMEMBRANE PROTEIN 14, 15 70 161 IPR005349 GO:0016020
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0342 - - vvi:100258149 320.087