Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0338 ATGGGGGATAGTGCGACGTTAGAGCAATCGGCTGGGAATATCGACGAACAGGTAAGTGGAGTAGTGGAGCAGGCCAAGGAATTGCAGGATGCTGCTTCCTCTCACATCTCCAGAACCTCCGTCGAAGAACAAGCTCTCCGCAAGAGTGCTCTTTCCCTTGATTCCAACATCCACAGACTCCGTTCCTTGATTGATTCTCTTCACCGAAATAAAATTTTGGATCCCAAGTTGGCCGACAAGCTCGACGAAGATTTACAGAGAGCCAGATGTATCCTGGTTGATGGGGATGCGTCTTCTTTTCTTCCTGGCAATGCGCAGGGTGGGTTTCTGAGAATGTTTCTGGGTCCTATAAATGTGCATGCCACTAGGAAGGACGTTCAGTTGAAAGTTAAAGAGGAGTACAACAGTTACAGAGATAGAACTGCCTTGCTGTTTCTTCTTTTTCCATCAACACTACTTATTCTAAGATCTTGGATATGGGATGGTTGCTTGCCAACGTTTCCAGTTCAGCTGTACCAGGCATGGCTGTTGTTCCTTTACACAGGTTTAGCTTTGCGAGAGAACATCTTAAGAGTGAATGGAAGTGATATTCGTCCATGGTGGATATACCATCACTATTGTGCTATGATTATGGCTCTCGTTAGTCTCACATGGGAAATCAAGGGACAACCAAACTGCGCACAAAAGCAGAGAGGGGTACAACTTTTCCTACAATGGGCTATGATGCAAGGAGTTGCTATGCTACTACAAAATAGATATCAACGCCAGAGACTTTATACTCGCATTGCATTGGGAAAGGCAAAGAGAATGGATGTTGTTTGGGGAGAAACAGCTGGGGTAGATGGTCAATTATGGCTGTTGTGTCCCATACTTTTCATTTTACAGGGTTTTGAAGCATATGTGGGTCTACTGCTGCTTAAGACTGCATTCGTCGGGGTTGTTTCTGAATGGCAGGTGGTATTTTGCGGGGTCCTTTTGGTTCTAATGGCAGTTGGGAACTTTGCAAACACAGTACAAACACTCATGGTCAAGTCTAGGTTCAAAGCAAAAATGAAAAGAAGTAAGAGCAAGCAGGAATTGAATTAG 1086 0.4466 MGDSATLEQSAGNIDEQVSGVVEQAKELQDAASSHISRTSVEEQALRKSALSLDSNIHRLRSLIDSLHRNKILDPKLADKLDEDLQRARCILVDGDASSFLPGNAQGGFLRMFLGPINVHATRKDVQLKVKEEYNSYRDRTALLFLLFPSTLLILRSWIWDGCLPTFPVQLYQAWLLFLYTGLALRENILRVNGSDIRPWWIYHHYCAMIMALVSLTWEIKGQPNCAQKQRGVQLFLQWAMMQGVAMLLQNRYQRQRLYTRIALGKAKRMDVVWGETAGVDGQLWLLCPILFILQGFEAYVGLLLLKTAFVGVVSEWQVVFCGVLLVLMAVGNFANTVQTLMVKSRFKAKMKRSKSKQELN* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0338 361 PANTHER TRANSMEMBRANE PROTEIN INDUCED BY TUMOR NECROSIS FACTOR ALPHA 12 355 IPR012926 GO:0016020
Vvi2g0338 361 Pfam TMPIT-like protein 21 347 IPR012926 GO:0016020
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0338 - - vvi:100259865 712.99