Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0319 ATGGCTACCGCACTAGAGAGACGATTGGCCTCTTTCTTTTCTTTCATTACATGCTCTAATTACTTTCTCTATCAAGACAACCACAAAGGCATCGACCACATCAACTTCAAGATGCCCAAGGGTCGACCTCTTTCATTGCAGACTGTGGAGCTCAAAGTAAGGATGTGCTGCACCGGCTGCGAGAGAGTCGTTAAAAATGCCATTTTCAAGCTTAGAGGAGTAGATTCTGTGGAGGTGGATCTGGGGATGGAAAAGGTAACAGTAGTTGGGTATGTGGATAGGAACAAGGTGCTAAAGGCGGTGAGGAGGAGTGGGAAGAGGGCTGAGTTCTGGCCCTACCCGGATCCGCCTTTGTACTTCACATCCTCTAACGATTATTTCAAAGATCTCACCAACGACTACAAAGAGAGTTACAACTATTGGAGGCATGGCTACAATGTAGCCGACAGGCATGGGACCATTCCACCCACTCACCGTGGAGACGACAAGGTCAGCAATATGTTCAATGACGACAACGTTAATGCTTGCTGTCTCATGTAA 540 0.4722 MATALERRLASFFSFITCSNYFLYQDNHKGIDHINFKMPKGRPLSLQTVELKVRMCCTGCERVVKNAIFKLRGVDSVEVDLGMEKVTVVGYVDRNKVLKAVRRSGKRAEFWPYPDPPLYFTSSNDYFKDLTNDYKESYNYWRHGYNVADRHGTIPPTHRGDDKVSNMFNDDNVNACCLM* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0319 179 CDD HMA 50 109 IPR006121 GO:0046872
Vvi2g0319 179 SUPERFAMILY HMA, heavy metal-associated domain 45 112 IPR036163 GO:0046872
Vvi2g0319 179 PANTHER COPPER TRANSPORT PROTEIN ATOX1-RELATED 48 176 IPR045181 GO:0046872
Vvi2g0319 179 Pfam Heavy-metal-associated domain 52 106 IPR006121 GO:0046872
Vvi2g0319 179 ProSiteProfiles Heavy-metal-associated domain profile. 46 109 IPR006121 GO:0046872
Vvi2g0319 179 Gene3D - 45 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0319 Vvi-Chr2 2559866 2561345 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0319 - - vvi:100261608 381.333