Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0316 ATGGGTGATGGACAAAAAAAAACCGAACTTTACGATGCTTCACAACGCCCATCCTCCTTGAATGAGAGGATCCTCTCATCAATGTCAAGGAGATCGGTTGCTGCTCATCCCTGGCATGATCTTGAGATTGGACCTGGAGCTCCTCAAATTGTCAACTGTGTTGTTGAGATAACGAAAGGAAGTAAAGTTAAGTATGAGCTTGACAAGAAAACTGGGCTGATTAAGGTCGACCGTGTCTTATATTCATCTGTGGTGTATCCTCATAACTATGGATTCATTCCCCGTACCCTATGTGAAGACAATGATCCACTGGATGTTTTAATCCTCATGCAGGAACCAGTTGTTCCTGGCTGTTTTCTTCGAGCCAGGGCCATTGGGCTGATGCCCATGATTGATCAGGGAGAGAATGACGATAAGATCATTGCTGTATGCGCTGACGATCCAGAATATCGACACTACACTGACATCAAAGAGCTTCCACCTCATAGACTAGCTGAGATCCGGCGATTCTTTGAAGACTATAAAAAGAATGAGAACAAGGAGGTTGCCGTGAATGATTTCTTACCTTCAAGTTCTGCTCATCAAGCTGTCCAGCATTCCATTGACCTTTATGCTGAGTATATATTGCAGAGCTTGAGGAGATGA 645 0.4403 MGDGQKKTELYDASQRPSSLNERILSSMSRRSVAAHPWHDLEIGPGAPQIVNCVVEITKGSKVKYELDKKTGLIKVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLILMQEPVVPGCFLRARAIGLMPMIDQGENDDKIIAVCADDPEYRHYTDIKELPPHRLAEIRRFFEDYKKNENKEVAVNDFLPSSSAHQAVQHSIDLYAEYILQSLRR* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0316 214 PANTHER INORGANIC PYROPHOSPHATASE 14 214 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Vvi2g0316 214 SUPERFAMILY Inorganic pyrophosphatase 29 209 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Vvi2g0316 214 Gene3D Inorganic pyrophosphatase 32 210 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Vvi2g0316 214 FunFam Soluble inorganic pyrophosphatase 4 32 210 - -
Vvi2g0316 214 CDD pyrophosphatase 49 202 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Vvi2g0316 214 Hamap Inorganic pyrophosphatase [ppa]. 49 205 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Vvi2g0316 214 ProSitePatterns Inorganic pyrophosphatase signature. 100 106 - -
Vvi2g0316 214 Pfam Inorganic pyrophosphatase 53 204 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0316 Vvi-Chr2 2536049 2537408 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0316 K01507 - vvi:100256417 437.187