Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0315 ATGGTTCCTAGCACCACAAAGTTGTTACTGACAGACATGGTTTTAGGTGTCGACCATGTTCCTTCAAACTACGTTCGACCCCCCTCTGAGCGTCCTAATTTTAAGGATGTCCAGGCATCAGATGTCTCCATTCCTCTCATAGACCTACAGGACCTCCAGGGTCCTGGCCGCCCTGATGTTGTCAAACAGATTGGCCAAGCCTGCCAACACAGTGGTTTCTTCCAGATTCAAAACCATGGGGTGTCCGAGACCATGATCAGTAACATTTTGAGGCTAGCCAGAGACTTTTTCCAGCTGCCAGAAAGCGAGAGGCTCAAGAACTACTCAGACAATCCTTCCAATCCAGTCAGGCTCTCCACTAGTTTTAATGTTAAGACAGAAAAGGTAGCCAACTGGAGGGATTTCTTGAGGCTCCATTGTTACCCTCTGGAGGACTATGTCCATCAATGGCCTTCCAATCCTCCATCTTTCAGGGAGGATGTGGCTGAGTATTGCACCAGTATCAGAGCACTAGTACTGAGACTGCTGGAAACCATTTCTGAGAGCTTAGGCCTCGAGAAGAACTACGTAAGTGGGGTGCTGGGCAAGCATGGGCAGCACATGGCTATGAACTACTATCCGCCGTGCCCGCAACCAGAGCTAACTTATGGGTTGCCTGGACATACTGATTGTAGTTTAATCACAGTTCTTCTCCAAGACGATGTACCCGGGCTTCAGGTTTTAAGAAATGGAAAATGGGTGTCAGTCAATCCTATTCCGAATTCCTTCATTGTCAACATCGGTGACCACATGCAGGTAATCAGCAATGATCGATACAAGAGCGTGCTGCATCGAGCTGTGGTGAACTGCAACAAGGATCGAATCTCCATCCCAACTTTCTACTGCCCATCACCAGATGCTGTAATAGGCCCTTCCCCAGAACTAGTCGACGATGATCACCCAGCTGTCTATAGGAATTTCACTTGCGAGGAATACTACACTCAGTTTTGGAACAGAGGGCTTGCAACTGAGTCCTGCTTGGACACGTTCAAAGCATCTACCACTTGA 1047 0.4823 MVPSTTKLLLTDMVLGVDHVPSNYVRPPSERPNFKDVQASDVSIPLIDLQDLQGPGRPDVVKQIGQACQHSGFFQIQNHGVSETMISNILRLARDFFQLPESERLKNYSDNPSNPVRLSTSFNVKTEKVANWRDFLRLHCYPLEDYVHQWPSNPPSFREDVAEYCTSIRALVLRLLETISESLGLEKNYVSGVLGKHGQHMAMNYYPPCPQPELTYGLPGHTDCSLITVLLQDDVPGLQVLRNGKWVSVNPIPNSFIVNIGDHMQVISNDRYKSVLHRAVVNCNKDRISIPTFYCPSPDAVIGPSPELVDDDHPAVYRNFTCEEYYTQFWNRGLATESCLDTFKASTT* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0315 348 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 196 296 IPR005123 -
Vvi2g0315 348 Pfam 2OG-Fe(II) oxygenase superfamily 199 296 IPR044861 -
Vvi2g0315 348 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE 40 320 - -
Vvi2g0315 348 Pfam non-haem dioxygenase in morphine synthesis N-terminal 44 153 IPR026992 -
Vvi2g0315 348 FunFam Protein DMR6-like oxygenase 2 7 333 - -
Vvi2g0315 348 Gene3D - 9 333 IPR027443 -
Vvi2g0315 348 SUPERFAMILY Clavaminate synthase-like 14 333 - -
Vvi2g0315 348 PRINTS Isopenicillin N synthase signature 284 302 - -
Vvi2g0315 348 PRINTS Isopenicillin N synthase signature 64 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0315 Vvi-Chr2 2531227 2532555 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0315 17 344 Glycosyltransferase AT5G59530 34.118 8.69e-59 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0315 K24028 - vvi:100251364 725.702